| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2037 |
|---|
| Symbol | |
|---|
| ID | 8725775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2461389 |
|---|
| End bp | 2463245 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | peptidase M61 domain protein |
|---|
| Protein accession | YP_003386881 |
|---|
| Protein GI | 284036951 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.129512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ACGCCCGGCT TCTGTATTTA CTTACTGTCT GGACATTTTT CACTCCATTT
TCATCAACTG CTACCCCAAC ACTTGCCGAC GAAGAAAACC CACCGGCAGC CACGCCTACC
GTAACGTATG TGCTCTCGAT GCCTGAGCCG CAGACGCATT ATTTCGAGGT GGAAATGCAA
TTGAAGAATG TGGCCGCTGC CACCAATGCG AAGAAAAATG GCTATGTAGA CATCAAAATG
CCGGTTTGGA CCCCCGGTTC TTACCTGATT CGTGAATACG CCAAAAATGT AGAAGCGTTT
ACGGCATCGG CTGGCGGCAA GACGGTTCCC AGCGAAAAAA TCCGGAAAAA TGCCTGGCGT
GTCCAGTCGA CCGACGATAA CCTGACCATC AAATACCGGG TATACGCCAA TGAGCTGACC
GTTCGGACGA GTTTTGTCGA TGCCGATCAC GGTTACGTAA CCCCCGCCGG TGTGTTTATG
TACCACGATG CCTTGAAAAA CATCCCCCTG CGCGTGGTTG TACAACCGTA CAAAGATTGG
AAAAACGTGG CGACAGGCCT CGAACCCGTT GCAGACCAGT CGTATACCTA CGAAGCTGCC
GATTTCGATA TTCTGGTCGA TTCCCCCATC GAGATCGGTA ATCATACCAC GTTCACCTTC
ACGGCGTCGA ATGTTCCGCA TTCGGTATCC ATGTTTGGCG ATGTAAATTA TAATGAGAAG
CAACTGGCGG CCGATTATAA GCGGGTTTGC GAAGCAGCCG CAACCGTGGT TGGCGAGCAT
CCCTGCAAAC ACTACACCTT TATTGTTCAT CATATCCCGC CGGGTGGGGG AGGACTCGAA
CACCTGAACT CCACAACCCT CGAAACGACC CGTAACGCCT ATTCGACCGA AGCGAACTAC
AAGCGGTTTC TGTCGCTGGT AGCCCACGAG TACTTTCACC TCTGGAATGT AAAACGAATT
CGCCCCGTTG CGCTGGGTCC GTTCGATTAT GAGAACGAGA ATTACACGCA CATGCTCTGG
CTGTCGGAAG GCTGCACGTC GTTCTATCAG GAATATATCC TGCGAAGGGC GGGTTTTCAC
TCGCCTGAAT CCTACCTCAA TCTGGTGGCC AGCAGCATAA CGGATATTGA GAACCAGCCC
GGTACGCGGG TGCAGTCGGC GGCTGAGTCC AGCTGGGATG CCTGGATCAA AGGGTACCGG
CCCAATGAAA ACTCCAGCAA CACCACAATT TCGTATTACA GCAAAGGCAG TGTGCTGGGC
ACATTGCTGA ATCTGGCTAT TCTGGGCGGA AGCAACGGGG AGCGCAATAT GGACGATCTG
ATGCGGCTTC TGTATTCGGA ATATTACAAA AAACAGAAAC GTGGGTTTAC GGACGATGAG
TTTCGTAAAG CAGCCGAGCA GGTGGCCGGT CGTAAACTCG ATGACTTTTT TAACATCGGT
GTTAACAGTG CCGAACCAAT TAATTACAAT ACGTACTTAG AGCCGGTGGG TATGCAGTTG
ATCAACGTTG CGGCCAGAAC GCAGGATGGT TTTCTGGGTG CTGCCACGAC GGTGGCAAAC
GGGAAAGCGA CTATTTCATC CGTTCGGCGC GGGTCGGCGG CTTACCAGGA TGGCCTTAAT
GTGGGTGATG AAGTTATTTC GGTAGATGGG TTCCGGGTTG GCGATGATCT GCTTCGGTTT
GTCAGCGGCC GTCGGGTGGG TGATAAACTG CTTGTGCTGG TTAACCGGGC GGGACAACTT
CGCGAAATTC CCGTTACCCT CACCCAGAAT CCGCTGGCCA GTTACCGGAT CGAGCCATTG
AGCAACCAGA CAGCTGCCCA AAAAGCGTTG TATGCGAAAT GGTTATATAT TAAATGA
|
|---|
| Protein sequence | MKKNARLLYL LTVWTFFTPF SSTATPTLAD EENPPAATPT VTYVLSMPEP QTHYFEVEMQ
LKNVAAATNA KKNGYVDIKM PVWTPGSYLI REYAKNVEAF TASAGGKTVP SEKIRKNAWR
VQSTDDNLTI KYRVYANELT VRTSFVDADH GYVTPAGVFM YHDALKNIPL RVVVQPYKDW
KNVATGLEPV ADQSYTYEAA DFDILVDSPI EIGNHTTFTF TASNVPHSVS MFGDVNYNEK
QLAADYKRVC EAAATVVGEH PCKHYTFIVH HIPPGGGGLE HLNSTTLETT RNAYSTEANY
KRFLSLVAHE YFHLWNVKRI RPVALGPFDY ENENYTHMLW LSEGCTSFYQ EYILRRAGFH
SPESYLNLVA SSITDIENQP GTRVQSAAES SWDAWIKGYR PNENSSNTTI SYYSKGSVLG
TLLNLAILGG SNGERNMDDL MRLLYSEYYK KQKRGFTDDE FRKAAEQVAG RKLDDFFNIG
VNSAEPINYN TYLEPVGMQL INVAARTQDG FLGAATTVAN GKATISSVRR GSAAYQDGLN
VGDEVISVDG FRVGDDLLRF VSGRRVGDKL LVLVNRAGQL REIPVTLTQN PLASYRIEPL
SNQTAAQKAL YAKWLYIK
|
|---|
| |