Gene Slin_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2022 
Symbol 
ID8725760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2442578 
End bp2443900 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content54% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003386866 
Protein GI284036936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC AGCCAAACCC ATCCCTTCGC TACTCCTGGT CCGTTGTATT CGTACTCATG 
CTGGCCTATA TTTCGTCGTT TATCGACCGG CAGATCCTTA GCCTGCTCGT CGGGCCAATC
AAACGTGATA TGCATTTAAG TGATACCCAG GTGAGTCTGC TCATGGGGTT AAGTTTTGCC
TTATTCTACA CGTTACTGGG TATTCCGATT GGTCGCTGGG CCGACCGCGC CAACCGCCGA
AACATTATGG TACTTGGTAT AGCCGCCTGG AGCCTGATGA CGGCCTTAGG TGGTGTCGTT
AAGTCGTACA CCCAGTTTTT CCTGATTAGG ATGGGGGTCG GCGTTGGCGA AGCCGCGCTC
TCACCCGCAG CTTATTCCAT GCTGAGTGAT TACTTTCCTA AGGAGAAATT AGCCACGGCT
ATCAGTGTCT ACTCGGCTGG TATTTACCTG GGGGCTGGTT TTGCGGTATT GATCGGAGCT
GCCCTGGTTG GCATGGGTAA CGGCCCCGCC ACGGTAACCT TGCCCATCAT TGGCACCATC
TTTTCCTGGC AGCTCCTCTT TTTTTACATT GCACTACCGG GTTTAGTGCT GGCATTGCTG
GTGCGATTAA TCAAAGAACC TGCCCGCCGG AACCTGTTGA TGAATGCGGC CGGACAAGCC
CAAACGCTGT CTGTCGGGGA TGTATTCCGG CTCATCGGTC AGCAACGGCG CGCTTTTTTC
AGCGTCACGT TAGGGGTCAC ATTTGTTTCG CTTGTAGCCT ATGCCTGCTC GGCCTGGGTA
CCTACCCTAT TTGTGCGCCG GTTTGGCTGG TCAACAGGTC AGATCGGTTT GCTTTATGGC
CTGGTAATTA CGGTATTTTC TACGTCGGGT ATCCTGCTAG GCGGGCGACT GGCCGACTGG
TTCACCCATC ACGGATATCC GAATGGTAAA TTGCGGGTTG GTATCATAGC GGCCGTGGGC
ATCCTGCTGA GTGCCGGCGT CTGTTTGCTT TCTAACCCGA ATGTAGCGAT TGCTTTATTT
GCGGTTCCCA GCTTTTTTGC TGCTTTTCCC TTTGGCGCAT CGTCGGCCGC CATTCAGGAG
ATTATGCCCA ATCAGGCGCG GGCTTTGGCC TCGGCCGTAT ACCTGCTAAT CGTGAACCTG
ATTGCCCTGG GTTTTGGCCC TACACTTGTT GCCTTACTGA CCGATTATGT CTTTCATGAT
GAGCAGGCAG TGCACCTATC CCTGGCTTGT GTCATGCTGG GCAGCAGTTT GCTGGCACTA
GCCTGTTACG CCTGGGGGCT TGGTGCATTC CGGACACCAG CGGCAGTTGA GCCCGTAGTG
TAA
 
Protein sequence
MSTQPNPSLR YSWSVVFVLM LAYISSFIDR QILSLLVGPI KRDMHLSDTQ VSLLMGLSFA 
LFYTLLGIPI GRWADRANRR NIMVLGIAAW SLMTALGGVV KSYTQFFLIR MGVGVGEAAL
SPAAYSMLSD YFPKEKLATA ISVYSAGIYL GAGFAVLIGA ALVGMGNGPA TVTLPIIGTI
FSWQLLFFYI ALPGLVLALL VRLIKEPARR NLLMNAAGQA QTLSVGDVFR LIGQQRRAFF
SVTLGVTFVS LVAYACSAWV PTLFVRRFGW STGQIGLLYG LVITVFSTSG ILLGGRLADW
FTHHGYPNGK LRVGIIAAVG ILLSAGVCLL SNPNVAIALF AVPSFFAAFP FGASSAAIQE
IMPNQARALA SAVYLLIVNL IALGFGPTLV ALLTDYVFHD EQAVHLSLAC VMLGSSLLAL
ACYAWGLGAF RTPAAVEPVV