Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2022 |
Symbol | |
ID | 8725760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2442578 |
End bp | 2443900 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003386866 |
Protein GI | 284036936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCC AGCCAAACCC ATCCCTTCGC TACTCCTGGT CCGTTGTATT CGTACTCATG CTGGCCTATA TTTCGTCGTT TATCGACCGG CAGATCCTTA GCCTGCTCGT CGGGCCAATC AAACGTGATA TGCATTTAAG TGATACCCAG GTGAGTCTGC TCATGGGGTT AAGTTTTGCC TTATTCTACA CGTTACTGGG TATTCCGATT GGTCGCTGGG CCGACCGCGC CAACCGCCGA AACATTATGG TACTTGGTAT AGCCGCCTGG AGCCTGATGA CGGCCTTAGG TGGTGTCGTT AAGTCGTACA CCCAGTTTTT CCTGATTAGG ATGGGGGTCG GCGTTGGCGA AGCCGCGCTC TCACCCGCAG CTTATTCCAT GCTGAGTGAT TACTTTCCTA AGGAGAAATT AGCCACGGCT ATCAGTGTCT ACTCGGCTGG TATTTACCTG GGGGCTGGTT TTGCGGTATT GATCGGAGCT GCCCTGGTTG GCATGGGTAA CGGCCCCGCC ACGGTAACCT TGCCCATCAT TGGCACCATC TTTTCCTGGC AGCTCCTCTT TTTTTACATT GCACTACCGG GTTTAGTGCT GGCATTGCTG GTGCGATTAA TCAAAGAACC TGCCCGCCGG AACCTGTTGA TGAATGCGGC CGGACAAGCC CAAACGCTGT CTGTCGGGGA TGTATTCCGG CTCATCGGTC AGCAACGGCG CGCTTTTTTC AGCGTCACGT TAGGGGTCAC ATTTGTTTCG CTTGTAGCCT ATGCCTGCTC GGCCTGGGTA CCTACCCTAT TTGTGCGCCG GTTTGGCTGG TCAACAGGTC AGATCGGTTT GCTTTATGGC CTGGTAATTA CGGTATTTTC TACGTCGGGT ATCCTGCTAG GCGGGCGACT GGCCGACTGG TTCACCCATC ACGGATATCC GAATGGTAAA TTGCGGGTTG GTATCATAGC GGCCGTGGGC ATCCTGCTGA GTGCCGGCGT CTGTTTGCTT TCTAACCCGA ATGTAGCGAT TGCTTTATTT GCGGTTCCCA GCTTTTTTGC TGCTTTTCCC TTTGGCGCAT CGTCGGCCGC CATTCAGGAG ATTATGCCCA ATCAGGCGCG GGCTTTGGCC TCGGCCGTAT ACCTGCTAAT CGTGAACCTG ATTGCCCTGG GTTTTGGCCC TACACTTGTT GCCTTACTGA CCGATTATGT CTTTCATGAT GAGCAGGCAG TGCACCTATC CCTGGCTTGT GTCATGCTGG GCAGCAGTTT GCTGGCACTA GCCTGTTACG CCTGGGGGCT TGGTGCATTC CGGACACCAG CGGCAGTTGA GCCCGTAGTG TAA
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Protein sequence | MSTQPNPSLR YSWSVVFVLM LAYISSFIDR QILSLLVGPI KRDMHLSDTQ VSLLMGLSFA LFYTLLGIPI GRWADRANRR NIMVLGIAAW SLMTALGGVV KSYTQFFLIR MGVGVGEAAL SPAAYSMLSD YFPKEKLATA ISVYSAGIYL GAGFAVLIGA ALVGMGNGPA TVTLPIIGTI FSWQLLFFYI ALPGLVLALL VRLIKEPARR NLLMNAAGQA QTLSVGDVFR LIGQQRRAFF SVTLGVTFVS LVAYACSAWV PTLFVRRFGW STGQIGLLYG LVITVFSTSG ILLGGRLADW FTHHGYPNGK LRVGIIAAVG ILLSAGVCLL SNPNVAIALF AVPSFFAAFP FGASSAAIQE IMPNQARALA SAVYLLIVNL IALGFGPTLV ALLTDYVFHD EQAVHLSLAC VMLGSSLLAL ACYAWGLGAF RTPAAVEPVV
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