Gene Slin_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2019 
Symbol 
ID8725757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2438736 
End bp2439803 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_003386863 
Protein GI284036933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGT GTATCTATAA ATGGCTACTC TTGCCATTCA GTGGACTTTA TGGGTTACTA 
ATGGATCTGC GTAATTGGTT ATTTAACAGC CAGTTATTAA AATCATACCA ACCTTCAATT
TATACGATCA GTATTGGTAA TTTGACTGTC GGCGGGACAG GAAAGACACC TATGGTTGAA
TTTTTGATTA AACGGTCAAT CGATCAGAGC TCCTATTTGG CTGGCGCAAC GGCAACGCTG
AGCCGGGGCT ATGGTCGGGA AACGACGGGC TTCCGGCTGG TTTCGGATTT GGATACGGCG
TCAACTGTTG GTGACGAACC TCTCCAGATG TACCGCAAGT TTGGAGCCTA TATTCGGGTA
AGCGTTGGCG AGCGTCGGGC CCCCGCTTTA CAGTCGTTGA TGCACCTTTA TCCCGACATT
AAGGAAGTTT TACTGGATGA TGCGTTTCAG CACCGGGCCG TTCAGCCGCA CCTGTCTATT
TTGTTGATGG ATTACAACCG GCCATTTTAT CAGGACTATC CATTTCCCGC CGGGCGGCTG
CGGGAACGGC GGCATGGGGC CCGTCGGGCA GATGCGATTG TCGTGACCAA GTGCCCGAAT
GATTTAAGTA CTGTCGAACA ACAGCGGATC GAAGCCGAAA TTCGTCCCTA CACGAGTGCT
GAAACGCCGG TTTTCTTTGC CGGGCTTCAC TATGGACAGC CCGTTTCCTT TGCTTCTAAA
AAGGTAGTTA CAGACGATGT CCAACAAGTA GTTCTGGTGT CAGGCCTGGC CAATCCGTTG
CCGCTGGAGC AGTACGTAAG CGACGCCTTT ACATTACGTC AGCACATCCG TTTTGCCGAT
CATCATGCCT ACCAGCGCAC CGACCTTGAC GCTATACTGG CGAAATTGCC CTCCGGGGCC
GTGGTACTGA CAACGGAGAA GGATTGGGTG AAACTGGACG CGTTATTAAC GGCGGAGGAG
CGGGATACGC TACCTTTGTT TTATTTGCCC GTAGCCATGC AGTTCCTGGA TAGGTACGAA
GCGGTATTTA GCCGGTTTGT AACAACCGCC CGACTTAAAA ATCGTTAA
 
Protein sequence
MKRCIYKWLL LPFSGLYGLL MDLRNWLFNS QLLKSYQPSI YTISIGNLTV GGTGKTPMVE 
FLIKRSIDQS SYLAGATATL SRGYGRETTG FRLVSDLDTA STVGDEPLQM YRKFGAYIRV
SVGERRAPAL QSLMHLYPDI KEVLLDDAFQ HRAVQPHLSI LLMDYNRPFY QDYPFPAGRL
RERRHGARRA DAIVVTKCPN DLSTVEQQRI EAEIRPYTSA ETPVFFAGLH YGQPVSFASK
KVVTDDVQQV VLVSGLANPL PLEQYVSDAF TLRQHIRFAD HHAYQRTDLD AILAKLPSGA
VVLTTEKDWV KLDALLTAEE RDTLPLFYLP VAMQFLDRYE AVFSRFVTTA RLKNR