Gene Slin_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2003 
Symbol 
ID8725741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2420559 
End bp2421008 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRES domain protein 
Protein accessionYP_003386847 
Protein GI284036917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.553327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.244891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTTT ATCGAATCAC AAAAGCCATC TACGCGGATA GGCTGGTTGC GTCGGGCGGG 
GCAGCCCGCT GGAATAGTCG TGGCCAGTTT GTTATCTACA CGGCTGGTAC ACGAGCACTG
GCCTGCCTCG AAAATGTCGT TCACCGCTCC AGCGAAGGGC TGATGGACAG CTTTCGGGTA
ATGGTCATCA ATCTGCCAGA CGGTCTTTTC GTGGATACCG TGGATACCGA ACGGTTACCT
GCCAACTGGT CTGATTATTG GCAATATAGC GTTTGCCAGC AGATAGGAGG GGAGTGGCTT
GAGAACAGGC GCTCTGCCGT ACTGCGCGTA CCATCCGCTA TTATACCCGA CGAGTGGAAT
TACCTCCTGA ATCCGGCGCA CCCCGATTTT TCCGGTATCA GCCTGGTTCG TACGGAGCCG
TTTTCCTTCG ACCCCAGGTT AAAATCCTGA
 
Protein sequence
MLVYRITKAI YADRLVASGG AARWNSRGQF VIYTAGTRAL ACLENVVHRS SEGLMDSFRV 
MVINLPDGLF VDTVDTERLP ANWSDYWQYS VCQQIGGEWL ENRRSAVLRV PSAIIPDEWN
YLLNPAHPDF SGISLVRTEP FSFDPRLKS