Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1998 |
Symbol | |
ID | 8725736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2411773 |
End bp | 2412765 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
Protein accession | YP_003386842 |
Protein GI | 284036912 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0878408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0113887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAA TACGCGTTGC TATTAACGGC TTTGGCCGTA TTGGGCGGTT ATCGTTCAGA CGACTACTAG AAAAAGAAAA CATAGAAGTA GTCGCTATCA ATGACCTAAC CGATAATGCG ACATTAGCTC ACCTGCTTAA GTATGACTCT GTTCACGGCA AATTCTCCGG AACAGTTGCT TCTGATGGCG ATAGTCTGAC CGTAAATGGC GTTAGAATTA ATGCATATGC TGAGCGTGAC CCCAAGAATC TTCCCTGGAG TGCATTAAAC GTTGATGTTG TTCTGGAATC AACCGGACGA TTCGTTGACG AAGCTGGTGC AGGTATGCAC CTACAGGCTG GCGCTAAAAA GGTAGTTATC TCTGCTCCTG CTAAAGGAAA TATTCCAACA GTAGTATTAG GTGTAAACGA TGACACCTTA ACGGGCGAGG AAACAATTAT TTCCAATGCT TCCTGCACAA CCAACTGCCT CGCACCAATG GCGAAAGTAC TGGATGACGT TTTCGGGATC GAAAAAGGTT ACATGACAAC CATTCACGCT TACACGGCAG ACCAGAATTT GCAGGATGCT CCCCACTCTG ATCTTCGCCG GGCCAGAGCT GCCGCCTTAT CAATTGTACC GACCTCAACA GGAGCCGCGA AAGCTGTAGG ACTCGTTCTT CCACAATTAA AAGGCAAACT TGATGGTAAC GCCATGCGTG TACCGACTCC AGATGGTTCT TTAACCGATC TGACAGTTGT TTTGAAACGG GAAGCTTCGA TTCAGGAAAT TAATGATGCG ATCAAACAGG CGTCGGAAAC TACGTTGAAC GGCATCCTTG AGTACTGCAC GGACGAAATT GTATCGATTG ACATTGTAGG TAATCCACAT TCCTGCATTT TCGACTCAAA ATTGACAGCT GCCAACGGTA CACTGGTTAA AGTTGTAGGC TGGTATGATA ACGAGTACGG TTACTCTAGC CGTGTTGCTG ATCTTATCGC TAAGCTATTT TAA
|
Protein sequence | MEKIRVAING FGRIGRLSFR RLLEKENIEV VAINDLTDNA TLAHLLKYDS VHGKFSGTVA SDGDSLTVNG VRINAYAERD PKNLPWSALN VDVVLESTGR FVDEAGAGMH LQAGAKKVVI SAPAKGNIPT VVLGVNDDTL TGEETIISNA SCTTNCLAPM AKVLDDVFGI EKGYMTTIHA YTADQNLQDA PHSDLRRARA AALSIVPTST GAAKAVGLVL PQLKGKLDGN AMRVPTPDGS LTDLTVVLKR EASIQEINDA IKQASETTLN GILEYCTDEI VSIDIVGNPH SCIFDSKLTA ANGTLVKVVG WYDNEYGYSS RVADLIAKLF
|
| |