| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1991 |
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| Symbol | |
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| ID | 8725729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2403930 |
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| End bp | 2405033 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003386835 |
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| Protein GI | 284036905 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.310287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0147414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATT TTCCGATAAA ACCATATTCT TTCGCAAAGG TAACCAACGC AATGGCCCAC
TCACTATTCC GGGTACATAT CATTCGTCAG GTACTCCTGC TGATTTTTAT AGCCATCGTC
TTCATTCGCT GCGGCAATAA CACGACCGAT GAGGCTGCTC AGTTTTTCCT GAAGGGGAAT
GTTCAGTTGC AGAAACGTGA GTACAAAGAA GCAATCCGGT TCTACTCAGA AGCCATCGCC
AAAAAATCAG ATTTTGCGGA CGCCTACAAT AACCGGGGGT TAGCCAAGTT TCGGGACGAC
GACCGGGAGG GGGCGTTGGC CGACTATACC CGGGCTGTTG AACTGGACCC TGATTTTGGT
ACGGCGTACT TTAATCGGGC CGAGGTTCTC CTTGAAACCG GTGATGCGGC CGGTAGTGTG
TCGGACTTGA TGCGGATCAA TAAACAATAC CAGGATTCTA CCTTTTATCA AACGCGTTTG
GGCGACGTCT ATGTACGACT GGGGAAGCAG GCCGAGGCTC AGGCAGCTTA TGACCGCGCT
TTGCAACTCA ACCCCGATAA TGTGGAGGCT CTAACCAATC GGGGGGCTTT GTTGTATAGC
CAGAAGGCCT ATGACCAGGC CGGTGAGGAC ATACAGCGGG CTCTTCGGCT CAATCCAAAG
CAAGATGCTG CCTTGAACAA CCAGAGTTTA CTGCTCGCGC GTGTCGGTAA TTTTGCCGAA
GCGCTCGTCT ATGTAGAACG TGCACTGGCT TTACAACCCC GACAGCCGTA TTACCTGAAC
AACAAAGCGT ATTTATTGCT GAAACTAAAC CGGGCTTCCG AAGCACTTCC GGTGGTGCAG
GAGTCTCTGC AACGCGATGA CCGGAATGCC TGGGCTCATC AAACCCTCGG GCTGTATTAC
CTGAGTCAGA AACAGGCGGA CAAGGCACTT ACCGAATTTC GGCAGACCGA AAAACTGGAT
GCGTCCGTAG ATCAGGTCTA TTATTATATC GGTCTAGCGG AGCAGGCCCT CAACCAGCAG
CAGGCCGCCT GCGAAGCCTG GCGACTGGGC GAATTGGCCG GGGATGAACA GGCCAGAAAA
ATCCGGGCTC AGCAATGTAA GTAG
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| Protein sequence | MNYFPIKPYS FAKVTNAMAH SLFRVHIIRQ VLLLIFIAIV FIRCGNNTTD EAAQFFLKGN
VQLQKREYKE AIRFYSEAIA KKSDFADAYN NRGLAKFRDD DREGALADYT RAVELDPDFG
TAYFNRAEVL LETGDAAGSV SDLMRINKQY QDSTFYQTRL GDVYVRLGKQ AEAQAAYDRA
LQLNPDNVEA LTNRGALLYS QKAYDQAGED IQRALRLNPK QDAALNNQSL LLARVGNFAE
ALVYVERALA LQPRQPYYLN NKAYLLLKLN RASEALPVVQ ESLQRDDRNA WAHQTLGLYY
LSQKQADKAL TEFRQTEKLD ASVDQVYYYI GLAEQALNQQ QAACEAWRLG ELAGDEQARK
IRAQQCK
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