| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1987 |
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| Symbol | |
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| ID | 8725725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2398304 |
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| End bp | 2399167 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003386831 |
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| Protein GI | 284036901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0551332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00228091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGACAGC TAAAAATTTC AAAACAGATA ACCAACCGCG AGAGCCAGTC GTTAGACAAG
TACTTGCAGG AAATTGGTAA GGTGGATCTG CTTACGCCCG ATGAGGAAGT AACGCTGGCC
CAGAAAATTA GGGAAGGTGA CCAATTGTCG CTGGAACGAT TAACGAAAGC AAACCTGCGT
TTCGTCGTAT CGGTTGCCAA ACAGTATCAA AATCAGGGGC TTTCATTAGG TGACCTGATC
AACGAAGGAA ACCTGGGTCT GATCAAGGCT GCTCAGCGCT TCGACGAAAC GCGTGGATTT
AAATTCATCT CGTACGCCGT TTGGTGGATT CGTCAGTCTA TTCTCCAGGC CCTGGCCGAG
CAGTCACGGA TCGTGCGTCT GCCCCTCAAC CGGGTAGGTT CGCTGAACAA AATTTCAAAG
ACGTTCTCCG ATCTGGAGCA AAAATTCGAG CGGGAACCGT CGCCGGAAGA ACTGGCAGCC
GTGCTGGAAA TTTCAGCCGC TGAAGTTGTT GACACCCTGA AGATTTCGGG TCGTCACGTA
TCCATGGATG CGCCTTTCGT ACAGGGTGAA GAAAACAGCC TGCTCGATGT ACTGGAAAAC
GACGGCGAAG ACAAGCCTGA TTCGGGCCTG ATCAATGACT CGCTGCGGAA GGAAGTACAA
CGGGCACTCT CGACGCTCAC CCAGCGCGAA GCCGATGTGA TCACGCTTTA TTTCGGTCTG
AATGGTGAAC ACGCCATGAC GCTCGAAGAA ATTGGTGAAA AATTCAACCT GACCCGTGAA
CGGGTTCGGC AGATAAAAGA AAAAGCCATT CGTCGCCTGC GCCACACCTC ACGGTCGAAA
GCGTTGAAGA CGTACCTGGG CTAA
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| Protein sequence | MRQLKISKQI TNRESQSLDK YLQEIGKVDL LTPDEEVTLA QKIREGDQLS LERLTKANLR
FVVSVAKQYQ NQGLSLGDLI NEGNLGLIKA AQRFDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN RVGSLNKISK TFSDLEQKFE REPSPEELAA VLEISAAEVV DTLKISGRHV
SMDAPFVQGE ENSLLDVLEN DGEDKPDSGL INDSLRKEVQ RALSTLTQRE ADVITLYFGL
NGEHAMTLEE IGEKFNLTRE RVRQIKEKAI RRLRHTSRSK ALKTYLG
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