Gene Slin_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1961 
Symbol 
ID8725698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2369522 
End bp2370322 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386805 
Protein GI284036875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0685791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.152282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCTA CCTTATTGTC CAGTTTTTTT ACTAATAAAC TGGACAATTG CCGATTTATA 
GTGTACTATT GTCTCATGAA AACGACTGAG TATCTGACCT CTACTATTGA TAAGCTTCCA
AAGGGCTATG TATTCACGTT CTCAAACTTT AATATTCAGC CCGATCAAAC GGAGGCAGTC
ATTAAGGCAT TGAACCGGAT GGTGCAGACC GGGCAGCTGG CAAAACTGTC AAAAGGCCGT
TATTATAAGC CAGAAAACAC GCCCTTTGGA CCTCTTCTCC CCGATATTAG AGAGGTCGTG
AAAGACTTGT TGGAAGACAA TGGCAAGATT ATCGGTTATC TGACGGGTTA TAGTATTTAT
AACCAGTTGG GTTTGACAAC CCAGGTCAGT AACACCATTC AAATTGGCAA AAATGACATC
CGCCCGACGT TTAAGCGAGA GCGTTACACG ATTTCATTTA TCAGGCAGAA AAACACCATT
ACCAAAGAGA CTGTCCCGCT GTTACAACTG CTGGATACCA TGCGCTATAT CAAGAAAATA
CCGGATACCG ATCTTCAAAC CTCTACAAAG CGCCTGCTGG ATATCCTAAA AGACCTAGCG
GAGGATGAGC AAAAGACGCT TGTCCGGCTG AGCCTAAAAT ACCCGCCAGC GACCAGAGCC
TTGTTGGGTG CGATGCTGGA TAAATTGGGG AAAGAGATAT TCACCTCAGC TCTTTCAAAA
TCCTTGAACC CGATAACGAC CTATAAACTG CCGGGCATTG GTAACATTCT CCGCACGGCA
ACAAATTGGC ATATCGTATG A
 
Protein sequence
MPPTLLSSFF TNKLDNCRFI VYYCLMKTTE YLTSTIDKLP KGYVFTFSNF NIQPDQTEAV 
IKALNRMVQT GQLAKLSKGR YYKPENTPFG PLLPDIREVV KDLLEDNGKI IGYLTGYSIY
NQLGLTTQVS NTIQIGKNDI RPTFKRERYT ISFIRQKNTI TKETVPLLQL LDTMRYIKKI
PDTDLQTSTK RLLDILKDLA EDEQKTLVRL SLKYPPATRA LLGAMLDKLG KEIFTSALSK
SLNPITTYKL PGIGNILRTA TNWHIV