Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1961 |
Symbol | |
ID | 8725698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2369522 |
End bp | 2370322 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386805 |
Protein GI | 284036875 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0685791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.152282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCCTA CCTTATTGTC CAGTTTTTTT ACTAATAAAC TGGACAATTG CCGATTTATA GTGTACTATT GTCTCATGAA AACGACTGAG TATCTGACCT CTACTATTGA TAAGCTTCCA AAGGGCTATG TATTCACGTT CTCAAACTTT AATATTCAGC CCGATCAAAC GGAGGCAGTC ATTAAGGCAT TGAACCGGAT GGTGCAGACC GGGCAGCTGG CAAAACTGTC AAAAGGCCGT TATTATAAGC CAGAAAACAC GCCCTTTGGA CCTCTTCTCC CCGATATTAG AGAGGTCGTG AAAGACTTGT TGGAAGACAA TGGCAAGATT ATCGGTTATC TGACGGGTTA TAGTATTTAT AACCAGTTGG GTTTGACAAC CCAGGTCAGT AACACCATTC AAATTGGCAA AAATGACATC CGCCCGACGT TTAAGCGAGA GCGTTACACG ATTTCATTTA TCAGGCAGAA AAACACCATT ACCAAAGAGA CTGTCCCGCT GTTACAACTG CTGGATACCA TGCGCTATAT CAAGAAAATA CCGGATACCG ATCTTCAAAC CTCTACAAAG CGCCTGCTGG ATATCCTAAA AGACCTAGCG GAGGATGAGC AAAAGACGCT TGTCCGGCTG AGCCTAAAAT ACCCGCCAGC GACCAGAGCC TTGTTGGGTG CGATGCTGGA TAAATTGGGG AAAGAGATAT TCACCTCAGC TCTTTCAAAA TCCTTGAACC CGATAACGAC CTATAAACTG CCGGGCATTG GTAACATTCT CCGCACGGCA ACAAATTGGC ATATCGTATG A
|
Protein sequence | MPPTLLSSFF TNKLDNCRFI VYYCLMKTTE YLTSTIDKLP KGYVFTFSNF NIQPDQTEAV IKALNRMVQT GQLAKLSKGR YYKPENTPFG PLLPDIREVV KDLLEDNGKI IGYLTGYSIY NQLGLTTQVS NTIQIGKNDI RPTFKRERYT ISFIRQKNTI TKETVPLLQL LDTMRYIKKI PDTDLQTSTK RLLDILKDLA EDEQKTLVRL SLKYPPATRA LLGAMLDKLG KEIFTSALSK SLNPITTYKL PGIGNILRTA TNWHIV
|
| |