Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1953 |
Symbol | |
ID | 8725690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2363715 |
End bp | 2364932 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003386797 |
Protein GI | 284036867 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.247559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.500213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCTT CGATCAAGAT TGTCCTGCGT AAGAAACCCA ATCAGGATGG CACGTTTCCC ATTGCCATTC GTATAACCAA AGACCGCAAG TCCACGTATA CCTATCTAGG ATACAGTGTG ACCGAAGCCC AATGGGATGC CAAAGAGCAT AAAGTTAAAA AAAACCATCC GAATTCAACC CGGCTGAATA ACCTCATTGA GAACAAAAAA ACGGAACTCA GTGATAAACT GATCGAACTG CAAGTCCAGC AGAAAGACAC ATCGGTAAGC GCCATTCGCA AGCAGATCAA ACCGAAACAA CATACATCCT TTTTTACGCA GGCAGGTGCG TACATTGAGA ATATGCGTAA AGAGGGCAAG TATAACCGCG TACTGACAGA AGAGGCCCGT ATCAAACATT TTAAATCCTT TCTGGATGAA GGTGACATTA CGTTCCCAGA GATTGATGTG CCGCTGCTCA ACCGGTTCCG TGCATATTTG AAAAGCGAGC GGAAAGTCAG TGAACGAACG ATCATCAACC ATCTGATTCT AATCCGCACC GTTTATAATC AGGCGATTGC CGGTGATATT GTTGACCGAA AATATTATCC GTTTGGCAAA GGGAAAATTG GTATCAAATT TCCAGACTCG ATTAAGCTGG GACTGGTGCC AAAAGAAGTG AGAGCACTGG AAACCGTTGA TCTGTCCGAC AACACTTATT ACAACCATGC CCGAAACCTC TGGCTCATGG CATTCTACTT CGCCGGGATG CGTGTATCTG ATGTGCTGCG GCTTAAATGG TCGGATTTTC AGGATGACCG GCTCCATTAT ACAATGGGCA AGAACAAAAA GACGGGGTCA TTAAAAACAC CGGACAAGGT CATTGGCATT CTCAGCCAAT ATCGTCAAGA CCCCAAAAAA CATAACTTGA TTTTTCCTGA ACTCAAAGTA CTGGATGATC TGGATGATAC GTATCATGTG CAACGTAAAA TTTCTTATGC TGTCAAGCGC CTGAATACGG CATTGGAGGA GGTGGCCAAA CGTGCCGAAA TTACCAAGCC TGTGACGATG CACATTGCCC GGCATACTTT CGGCAACATT TCAGGCGATA AAATCCCTAT TCAGAGACTA CAGGAATTGT ACCGGCATTC CAGCATTACC ACGACCATTG GCTACCAGAG CAGCTTTATT AACAAGACAG CAGACGATGC ATTAGACGCG GTTTTGAACA TGGAGTAG
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Protein sequence | MASSIKIVLR KKPNQDGTFP IAIRITKDRK STYTYLGYSV TEAQWDAKEH KVKKNHPNST RLNNLIENKK TELSDKLIEL QVQQKDTSVS AIRKQIKPKQ HTSFFTQAGA YIENMRKEGK YNRVLTEEAR IKHFKSFLDE GDITFPEIDV PLLNRFRAYL KSERKVSERT IINHLILIRT VYNQAIAGDI VDRKYYPFGK GKIGIKFPDS IKLGLVPKEV RALETVDLSD NTYYNHARNL WLMAFYFAGM RVSDVLRLKW SDFQDDRLHY TMGKNKKTGS LKTPDKVIGI LSQYRQDPKK HNLIFPELKV LDDLDDTYHV QRKISYAVKR LNTALEEVAK RAEITKPVTM HIARHTFGNI SGDKIPIQRL QELYRHSSIT TTIGYQSSFI NKTADDALDA VLNME
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