| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1951 |
|---|
| Symbol | |
|---|
| ID | 8725688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2362278 |
|---|
| End bp | 2362673 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_003386795 |
|---|
| Protein GI | 284036865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.578106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.399763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA TAAAAAATGG AACGCAGGCT TCCGCCAAAG GGCCCGAAGC CTGGTTTACC
GGTTCAGTAC GAATTGACCC CCTGTTTGCC AAAAAAGAAG TAACCAAAGG GGCTGGCGCG
CTGGTAACGT TCGAACCCGG AGCCCGAACC GTCTGGCATA CCCATCCGGC CGGACAAACC
CTTATCGTCA TTTCTGGCCT GGGCTGGGTA CAACGCGAAG GTGGCCCAAT CGAAGAGATC
CAGCCTGGTG ATGTGGTCTG GTTTGAACCT AACGAAAAGC ACTGGCACGG CGCATCGCCC
ACTAAAGCCA TGAGTCACAT AGCCATTCAG GAAGCGGTAA ACGGCGAGGT GGTAACCTGG
ATGGAAAAAG TGAGCGATAG CGACTACTCC GGGTAA
|
|---|
| Protein sequence | MEIIKNGTQA SAKGPEAWFT GSVRIDPLFA KKEVTKGAGA LVTFEPGART VWHTHPAGQT
LIVISGLGWV QREGGPIEEI QPGDVVWFEP NEKHWHGASP TKAMSHIAIQ EAVNGEVVTW
MEKVSDSDYS G
|
|---|
| |