| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1948 |
|---|
| Symbol | |
|---|
| ID | 8725685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2359394 |
|---|
| End bp | 2359879 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_003386792 |
|---|
| Protein GI | 284036862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.161363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTA GCTGCTTCGA ACTGACCCTT GTGGGGGTAT TCTTCATTAG TCTTTCGGCT
ACTGCACAAA CCAGTGCGCC TACAGCAGCC AGTAAAACCA CTGTCTTTCC CAAAGGGGAG
AAGGCTCCGG CGGGCAATTT TACGGGAACT GTCTGGGTAC AACCCCTGGT CGATAATGAT
TCGGTCTATA ATCTGATCAG CGGGAGTGTC ACCTTCGAAT CAGGCGCCCG AACGAATTGG
CATATACACC CAACCGGTCA GATTCTGATG ATTACAGAAG GTACCGGCTA TCACCAGATT
AAAGGTCAGC CTCGCGAGCT TATCCGGAGA GGGGAAGTTG TCAAATGTCC GCCCAATGTA
GCGCATTGGC ATGGAGCCAG CCCCGGAAGC AGCATGACGC ATATTTACAT GATTCCTAAT
ACAGAAAAAG GAATTGTTCA ATGGCTGCAA CCGGTTAGTG AGGAGGAATA CAACCGTTCG
AAATAA
|
|---|
| Protein sequence | MRTSCFELTL VGVFFISLSA TAQTSAPTAA SKTTVFPKGE KAPAGNFTGT VWVQPLVDND
SVYNLISGSV TFESGARTNW HIHPTGQILM ITEGTGYHQI KGQPRELIRR GEVVKCPPNV
AHWHGASPGS SMTHIYMIPN TEKGIVQWLQ PVSEEEYNRS K
|
|---|
| |