| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1945 |
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| Symbol | |
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| ID | 8725682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2356484 |
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| End bp | 2358943 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003386789 |
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| Protein GI | 284036859 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.970344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.175983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACG CGCCCATGAA AATAAAGTTA TCTACCTTAC TCATCCTTGT TATCACGCTG
CTGGCGGTCA GCTCCCAGTC GATGGCGCAA TCCACCATTC GGGAAGATCT TCTGCAAAAA
CCCTGGAAAG CCCAGTGGAT TACCGGGCCG GGGCGGCCTA TCAATCGGTT TACGGCGGCA
TCGGACCTGA GTCTGAAAGA CTATGGCGTG TATAAATTCA GGAAAACCAT TGAGTTGGCC
AGTAAACCAG CTTCGTTTGT CGTCCATGTG TCGGGCGACA ACCGGTACAA ACTCTTTGTG
AATGGGAAAC AGGTAGCCCA GGGGCCAGCG AGGGGGGATC TGTACTTCTG GAATTTCGAA
ACGCTGGATT TGGCTCCTTA CCTGCAGGCG GGCCGGAATA CGGTGGCGGC TGTGGTCTGG
AACGATGGAC GGCTGAAGCC CGAAGCCCAG ATCTCTTTCC TGACGGCCTT CATCCTCCAG
GGCGATAGTC CTGCCGAGGA AATCCTGAAC ACGAACGATA GCTGGAAAAC CAGTAAGGAC
GAAAGCTACC AGCCCTTGGC TGTGCGGGTT CCTGGCTATT ACGTGGCCGG GCCTGCCGAA
CTGCTCGACA TGAGCAAGCA CCTGAAAGGC TGGGAGAAAA CCGACTACGA TGAGAGTAAA
TGGGTCAGTG CCCGCCAGAT TGGCCCCGGC GTTACTAAGG ATGCGGCTGT CAATTCGACG
GGCTGGATGC TGGTGCCCTC CCCATTGCCC GCTATGGAAA TGACAACCCA GCGGCTGGCT
ACCACCCGAA AAGCAAGCGG TGTTACTGTG CCTGCTGGTT TTCCGGCCAC GGCCACAAAA
GTGACCATTC CCGCCAACAC AACGGCGACG CTCCTGCTGG ATCAGGGCTT TCTGACCAAC
GCTTACCCAA CACTTCAGTT TAGCGGTGGG CAGGGCGCGG GCCTATCCAT CGGCTACTCG
GAAGGGCTCT ATATCCGCAA GAATGAAAAC GTCAACGGCC CAAGAGTGCC CTCGCTGCCG
AAAGGGAACC GGAACGAGGT CGACGGAAAA ATCTTTATCG GTAAGGCAGA TAGTCTCCTT
TCCGACGGAA CGGCCAATCA GGTGTACACC CCACTCTGGT GGCGAACCTA CCGGTACGTG
CAAGTGGTAG TGAGCACCAA AGCCGACCCG CTCGTGATCG ACGATATCTA CGGTACCTTT
ACGGGGTATC CGTTTACGGT CAATGCCCAG CTCAAAAGTC AGAATCCCGA GTTGGGTAAA
ATGCTCGACA TTGGCTGGCG AACTGCCCGG CTCTGCGCCT TCGAAACCTA CATGGACTGC
CCCTATTACG AACAGCTGCA ATACATTGGC GATGCCCGCA TACAAGGGCT GGTTTCGCTC
TTCTACGCCG GGGATGATCG CCTGTTGCGC TACGGGCTGA CGCTCATGGA CCATTCCCGA
CTTGCCGAAG GCATCACCCT GAGCCGGTAC CCAACGGACC TGCATCAGCA GATTCCGACG
TTCTCGCTCT GGTGGGTGGC TATGCTGCAC GATTACTATC GCTACCGCCC CGACAGCCTG
TTCATTAAAG ACAAGCTGCC CGGTGCCCGT CAGGTACTGT CGTTCTTTGA ACGCTACCAG
CAGGCCGATG GATCGCTGAA AAATGTGCCG TACTGGATAT TCACCGACTG GACGCAGGGC
AAAGGCTGGG ATTTCGGGAT GGCACCCGTC GGTCAACATG GCGAATCGGC AGTGCTCGAT
ATGCAGCTGT TGTGGACGTA TCAACTGGCC GCCGAACTTG AAAACAACAT TGGGCTGAAA
GAACTGGGCC GACAGTACAC AAGCCGGGCC GAGCAGCTTA AAAAGACCAT CCTGCGTAAA
TACTGGAACT CGGGTAGAAA CCTCTTTGCC GATACCGAAA CGAAAGATAC CTATTCGCAG
CACGCCAATT CGCTGGCTAT TCTGTCGGGG GTAACCCAGG CCAGTCAGGC GACGGCGATT
GCCAAAACGA TGCTGGCCGA TACGTCGCTG GCACCGGCTT CGATCTACTT CAAGTTTTAC
CTGCACCAGG CCCTCACCAA AGCCGGGCTG GGCGACGATT ACCTGACGTG GCTGGATAAG
TGGCGCGAAA ACATGGCATC GGGTCTGACC ACCTGGGCCG AAACGTCGAA TGTGAACACC
TCGCGCTCCG ATTGTCATGC CTGGGGATCG AGCCCCAACT TGGAGTTTTT CAGGACCGTG
CTGGGGATCG ACAGCGACGC GCCGGGTTTT GCCAAAGTAA AAATCACGCC CCATTTAGGG
TCCATTGACG CCATCAGTGG TGAAATGCCC CACCCGAACG GGAAAGTGTC GGTAGCCTAC
AAAGTGGAGA AAGGGGCGCT CAAAGCTGAT ATTACGCTTC CGCCCAAAAC AACCGGAAGT
TTTGTCTGGA AAGGAAAAAC GGCCGTACTC AACGCCGGGA AGAATACGCT GACGATGTAA
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| Protein sequence | MQHAPMKIKL STLLILVITL LAVSSQSMAQ STIREDLLQK PWKAQWITGP GRPINRFTAA
SDLSLKDYGV YKFRKTIELA SKPASFVVHV SGDNRYKLFV NGKQVAQGPA RGDLYFWNFE
TLDLAPYLQA GRNTVAAVVW NDGRLKPEAQ ISFLTAFILQ GDSPAEEILN TNDSWKTSKD
ESYQPLAVRV PGYYVAGPAE LLDMSKHLKG WEKTDYDESK WVSARQIGPG VTKDAAVNST
GWMLVPSPLP AMEMTTQRLA TTRKASGVTV PAGFPATATK VTIPANTTAT LLLDQGFLTN
AYPTLQFSGG QGAGLSIGYS EGLYIRKNEN VNGPRVPSLP KGNRNEVDGK IFIGKADSLL
SDGTANQVYT PLWWRTYRYV QVVVSTKADP LVIDDIYGTF TGYPFTVNAQ LKSQNPELGK
MLDIGWRTAR LCAFETYMDC PYYEQLQYIG DARIQGLVSL FYAGDDRLLR YGLTLMDHSR
LAEGITLSRY PTDLHQQIPT FSLWWVAMLH DYYRYRPDSL FIKDKLPGAR QVLSFFERYQ
QADGSLKNVP YWIFTDWTQG KGWDFGMAPV GQHGESAVLD MQLLWTYQLA AELENNIGLK
ELGRQYTSRA EQLKKTILRK YWNSGRNLFA DTETKDTYSQ HANSLAILSG VTQASQATAI
AKTMLADTSL APASIYFKFY LHQALTKAGL GDDYLTWLDK WRENMASGLT TWAETSNVNT
SRSDCHAWGS SPNLEFFRTV LGIDSDAPGF AKVKITPHLG SIDAISGEMP HPNGKVSVAY
KVEKGALKAD ITLPPKTTGS FVWKGKTAVL NAGKNTLTM
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