Gene Slin_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1942 
Symbol 
ID8725679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2352445 
End bp2353311 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content35% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386786 
Protein GI284036856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.199981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.652565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TTTTAAGTTG GTCAGGTCCA GTAAGTCATA AAATAGCCAC TGTATTTAGA 
GATTGGATTC CTCTTGTGCT GCAATCGGTT GAACCTTATG TTTCATCAGA AGACATTGAT
AAAGGGACAA GATGGAGTTC CGACATAGCA AAAGAATTGG AGGAGAGCAG GTATGGTATT
ATCTGTGTAA CTCACCAAAA CTTGAAAGCC CCTTGGGTTA ATTTTGAAGC AGGAGCATTA
TCTAAGACAA TTGAAAAGTC TAATGTTGCT CCATTTCTTT TTAATATAAA AAAGTCAGAA
GTTGATGGGC CTTTGTTGCA GTTTCAGTTA ACAGTTTATG ACAGAGAGGA TATTAAGAAA
TTAATTAATA GTATCAACAA CGCTTCTGAT ACTGTTGTCT TAGACCAACC AAAACTTGAA
AAAATATTTG CTCAGTGGTG GCCATCTTTA GAGAGTAGTT TTGAGGTAAT CCTTCAGGAA
TGTAAGACTT TAGAAAAAGC CGATAAGACT CCTCAACAAA AGGAGCCTGT TAGTGAAGCT
TACGACAAAA TATTAGAAGA GTTGCTTGAA TTGACAAGAC TTCAAGTAAA AATCTTAAAA
AATCCAGAAG AGTTGTTACC ACCCAAATAT CTCGCTTACG CGCTTAGAGA GTCACCACCT
AGAAGAAATA GTAGGGCAAA TATGACTATA CAAGAACTGC ATAGTTTATA CAGACATCTT
AGAGAAATTA CTAGAAGTAC GGTTTTAGAA AATCAGGAAG AATATTCCAA AAAAATGGCC
GAAGTGACAG ATATTGTCAA TGTGATGGGC GACCAAATTG AATATTTATA TAGGAGAAGT
AGAGATATTG AGTCGAACTT TATGTGA
 
Protein sequence
MKLFLSWSGP VSHKIATVFR DWIPLVLQSV EPYVSSEDID KGTRWSSDIA KELEESRYGI 
ICVTHQNLKA PWVNFEAGAL SKTIEKSNVA PFLFNIKKSE VDGPLLQFQL TVYDREDIKK
LINSINNASD TVVLDQPKLE KIFAQWWPSL ESSFEVILQE CKTLEKADKT PQQKEPVSEA
YDKILEELLE LTRLQVKILK NPEELLPPKY LAYALRESPP RRNSRANMTI QELHSLYRHL
REITRSTVLE NQEEYSKKMA EVTDIVNVMG DQIEYLYRRS RDIESNFM