Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1942 |
Symbol | |
ID | 8725679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2352445 |
End bp | 2353311 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386786 |
Protein GI | 284036856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.199981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.652565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAT TTTTAAGTTG GTCAGGTCCA GTAAGTCATA AAATAGCCAC TGTATTTAGA GATTGGATTC CTCTTGTGCT GCAATCGGTT GAACCTTATG TTTCATCAGA AGACATTGAT AAAGGGACAA GATGGAGTTC CGACATAGCA AAAGAATTGG AGGAGAGCAG GTATGGTATT ATCTGTGTAA CTCACCAAAA CTTGAAAGCC CCTTGGGTTA ATTTTGAAGC AGGAGCATTA TCTAAGACAA TTGAAAAGTC TAATGTTGCT CCATTTCTTT TTAATATAAA AAAGTCAGAA GTTGATGGGC CTTTGTTGCA GTTTCAGTTA ACAGTTTATG ACAGAGAGGA TATTAAGAAA TTAATTAATA GTATCAACAA CGCTTCTGAT ACTGTTGTCT TAGACCAACC AAAACTTGAA AAAATATTTG CTCAGTGGTG GCCATCTTTA GAGAGTAGTT TTGAGGTAAT CCTTCAGGAA TGTAAGACTT TAGAAAAAGC CGATAAGACT CCTCAACAAA AGGAGCCTGT TAGTGAAGCT TACGACAAAA TATTAGAAGA GTTGCTTGAA TTGACAAGAC TTCAAGTAAA AATCTTAAAA AATCCAGAAG AGTTGTTACC ACCCAAATAT CTCGCTTACG CGCTTAGAGA GTCACCACCT AGAAGAAATA GTAGGGCAAA TATGACTATA CAAGAACTGC ATAGTTTATA CAGACATCTT AGAGAAATTA CTAGAAGTAC GGTTTTAGAA AATCAGGAAG AATATTCCAA AAAAATGGCC GAAGTGACAG ATATTGTCAA TGTGATGGGC GACCAAATTG AATATTTATA TAGGAGAAGT AGAGATATTG AGTCGAACTT TATGTGA
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Protein sequence | MKLFLSWSGP VSHKIATVFR DWIPLVLQSV EPYVSSEDID KGTRWSSDIA KELEESRYGI ICVTHQNLKA PWVNFEAGAL SKTIEKSNVA PFLFNIKKSE VDGPLLQFQL TVYDREDIKK LINSINNASD TVVLDQPKLE KIFAQWWPSL ESSFEVILQE CKTLEKADKT PQQKEPVSEA YDKILEELLE LTRLQVKILK NPEELLPPKY LAYALRESPP RRNSRANMTI QELHSLYRHL REITRSTVLE NQEEYSKKMA EVTDIVNVMG DQIEYLYRRS RDIESNFM
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