| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1938 |
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| Symbol | |
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| ID | 8725675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2345762 |
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| End bp | 2348167 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003386782 |
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| Protein GI | 284036852 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.17436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGTT TGAGCAGAAT AAGTTTATTG ATTGGGTTGT GGGTAGCCGC AGGGCTGGGG
TGTCTGGCGC AGAGCAGCAC CTGTACCAGC GTGCTGAAAG GGCAGATTCT GGGGCAGGAA
AACCGCGAGC CACTCGTTGG AGCGACTCTT TACGTTCGGG AGTTGAAAAC CGGTGCCGTT
GCTGATTCAG CGGGTTATTT TCAACTCGGG CAGCTGTGTC CGGGAAATTA TACCATCGAC
TTTCAGTTTG TTGGTTATAA AGTCACGACA CAGTCAATCG TGATCAGGCA GGAACCGCTG
GTTCGCTTAA ATCCGGTTTT GCTGGTGCCC GACAATCAAA CCCTGCAGGA GGTTGTCGTA
ACGGAACACC GGTCCGAAGC CCAGCAGCTG CTTCAAACAC AGGTGAGCCT GTCGGGGGCG
GCTCTCGACC AAACCAGGGG TCAATCGCTG GGCGAGAGTT TGAAGGCACT TACCGGCTTA
TACGCCATCC AATCCGGCCC CAGTATTTCA AAGCCGGTCA TTCACGGGCT TTACAGCAAC
CGAATTATAA TTCTCAACAA TGGCATCCGG CAGGAAGATC AGCAGTGGGG GAGTGAGCAC
GCGCCCCAGG TCGACCAGTT TCTGGCGTCC CGGCTGACGG TGATCAAAGG GGCGGCCAGT
ATCCGCTACG GGTCCGACGC TATTGGCGGG GTTATTTTGG TAGAGCCCAG CGCCATGCCC
ACCCGGCCGG GCATTCAGGC CGAAGTAAAT CTGGTTGGAG CAACGAACGG GGGCATGGGT
GTGGTATCAG GTCTGGTAGA AGGGGCATTC GATAAAAAAC TGGCCGGGTT AAGCTGGCGA
TTGCAGGGAA CCCTGAAACG GTCGGGCTAC GTCAAAACAC CGAACTACTA TCTCGAAAAT
ACCAGCTACC AAGAGAATAA CTTTTCCGGT GATCTGCATT ATGACCACAA GAATTTTGGT
GTCGAGTTGT TTTACAGTCA ATTCGATACG AAAGTGGGTC TGTTTACGGG TGCGCAGGTG
GGTAGTCTGG CCGATTTATA CACGGCCATT AGCCGACCTG AACCGCTGGT TCAGCCGGTT
TTTTCCTATG CATTGAACCG CCCTTATCAG GCCGTTCAGC ATGACTTGTT TAAAGGGCGG
GCCCATCTAC ATCTGCCAAA AGGGGGCACG CTGACCGCTA CCGTTTCCCG GCAGCAAAAC
ACCCGCCGGG AGTATGACTT TGTCTCGTTC AGCGGCATAA CGACGCCCGA ATTGTATCTG
AAATTAGTTA CCCATACCGC CGATCTGGTT TGGGAGCATG CGCCGATTAA AACGGAAGCC
GGAGGCCGTG CGGGGCAATG GTCGGGAAGT GTGGGTTTTA ACGGGATCAC GCAAGGCAAC
GTGCGGCAAT ATCTGTTCCT GATTCCTAAT TTCCGGAACT ACGGTGCCGG ATTATTTGCC
ATTGAACGCT ACGCAGTAGG ACGTCTGACC CTGGAGGGCG GGTTGCGGTA TGATTACCGC
TGGTTACGGG CTTACTTCCT CGATGAAGTT ACCAAACAAA TCTATTTTAC CACCCATAAC
TGGCAGAACG CCAACGGATC GCTGGGGGTA GCTTACCAGC TCCGGCCCGA CCTGACCCTG
ACCGGCAACG TTAGCACTGC CTGGCGGGCT CCTAATGTCG CGGATTTGTA TTCCAACGGC
CTGCACCAAA GCGCGGTAGC CTACGAACGG GGTAATCCCA ACCTGCGCCC GGAACAGGCT
GTCAACAGTA ACCTGGTGCT GGCCTATGCC GGGAAGCGGC TGAGTGGGGA AATTGGCGTT
TATAGCAACC GGATCGAAAA TTACATTTAC CTCAAGCCCG ATTCGGTACC CATTGTCCGG
CAGCGGGGTG CTTTCCCGTC GTATACCTAT AACCAGGTGC GGGCCACGTT TCGGGGAGTC
GATGCTACCC TGACCTATAA ATTTACCGAT CAGCTGGCGT TCACGACAAA AAACTCGCTG
CTGTTCGCCT ATAACCAGAC CGACCACGAC TACCTCGTTT TCATCCCCGC CAATCGGTCG
GATAATACGC TGCGTTACGA TTGGGACCGG TGGGGTAAAC TTGCCAAACC CTATGTGTCC
ATGACGGGCT TGTACGTATC CCGACAAAAC CGTTCTCCCT CCGTGACTAC CCGACAGGAG
AACGGGGCCG TTATTTTCAC CGGCGATTTT GCTGCGCCAC CACCCGCTTA TTTCCTGCTG
GGGGCCGAAG TGGGGTTCCA GACTCAGCTC GGCAAGCAGC CCCTTAGTGT CATCCTGAGC
GGCACCAACC TCGCCAATGT CGCTTACCGC GATTACCTGA ACCGGTTCCG GTATTTCGCC
GATGAGCCGG GACGCAACAT CATGCTCAAA GTGAAATTAC CACTGGCGTT TCCCAAAAGG
TCTTAA
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| Protein sequence | MGGLSRISLL IGLWVAAGLG CLAQSSTCTS VLKGQILGQE NREPLVGATL YVRELKTGAV
ADSAGYFQLG QLCPGNYTID FQFVGYKVTT QSIVIRQEPL VRLNPVLLVP DNQTLQEVVV
TEHRSEAQQL LQTQVSLSGA ALDQTRGQSL GESLKALTGL YAIQSGPSIS KPVIHGLYSN
RIIILNNGIR QEDQQWGSEH APQVDQFLAS RLTVIKGAAS IRYGSDAIGG VILVEPSAMP
TRPGIQAEVN LVGATNGGMG VVSGLVEGAF DKKLAGLSWR LQGTLKRSGY VKTPNYYLEN
TSYQENNFSG DLHYDHKNFG VELFYSQFDT KVGLFTGAQV GSLADLYTAI SRPEPLVQPV
FSYALNRPYQ AVQHDLFKGR AHLHLPKGGT LTATVSRQQN TRREYDFVSF SGITTPELYL
KLVTHTADLV WEHAPIKTEA GGRAGQWSGS VGFNGITQGN VRQYLFLIPN FRNYGAGLFA
IERYAVGRLT LEGGLRYDYR WLRAYFLDEV TKQIYFTTHN WQNANGSLGV AYQLRPDLTL
TGNVSTAWRA PNVADLYSNG LHQSAVAYER GNPNLRPEQA VNSNLVLAYA GKRLSGEIGV
YSNRIENYIY LKPDSVPIVR QRGAFPSYTY NQVRATFRGV DATLTYKFTD QLAFTTKNSL
LFAYNQTDHD YLVFIPANRS DNTLRYDWDR WGKLAKPYVS MTGLYVSRQN RSPSVTTRQE
NGAVIFTGDF AAPPPAYFLL GAEVGFQTQL GKQPLSVILS GTNLANVAYR DYLNRFRYFA
DEPGRNIMLK VKLPLAFPKR S
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