Gene Slin_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1933 
Symbol 
ID8725670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2338553 
End bp2339500 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386777 
Protein GI284036847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCTT ACTTCCCTTT CGGACAGCAA TTCAACGACA AAATGGGGAC TTTCCCTCTG 
TCTGAAAACG AACCACTTAT CGAACCAGAC GGCCACTACG CAAGGGAAAC AGCACTCAAA
AGACAGCTTC TCACTGAATT ACCGGCCTAT TATTACCAAT CGCTGCCAGG TCATAAAACA
GCACAATGGG AAGTCCTGGA GGCTCTTTTG ACGAATCTGT GTCAGTTTGA ACCCAGCCAG
TTTTCCCTCC GGACAGAAGG CAACCGCTGG CATTGGTCGA ACAACCGGCT GAACGAACAC
ACGTCCTTTA CGTTCGGTGA TGCCGGTTCG TTGCCCCTGG AACCGCTCGA TTGGGTGGGT
CGTCAGGTTC AGGAAGATCT TATTTTACTG GATGGACCGG AGGCTTCGCT GGTTGCCGGA
CAGCTTTGTT TTGGTAATGG CTGGTGCCTG GACGAAAAAA TCGGCCTACC CTTCTGGCAG
ATTCACGCGC CCATAACACC CATCGTTGAG CCGATGCTGC GGTCGGCTCA GAAACTGATG
GAACGATTAC CCGCTGGACG CCCGGTCTGG CGACTAAACT GGAGCGTAAA AATGTCTGAT
CAGCTGGACA TGACAAGCCG CCACACCCCT GCCTTAGACC AGCTCCTGAC CGAACGAGCC
CCCAGTTTAA CCCCAGAAAC CATTGCCGAA TGCCTGTATG TGCGTATTGA GCGGCAAACC
CTCACCCGTC TGCCGCGTTC GGGTGCCATC CTGTTTGGTA TTCATACGTA CCAGAACCGG
CTCTCGGACG AAGTCAGCAA ACGCCCCGAT GCCGCTGAAC GGCTCACAAA TGTTTTCAAA
ACCACGCCCC AGGCCATGCT TGATTACAAA GGCATGACCC CCTTCATGCC CGCATTACTG
GCTTACTTAA CAACGGCATC CCTCGTTACT ACCTGCCCAT CTGCCTGA
 
Protein sequence
MLPYFPFGQQ FNDKMGTFPL SENEPLIEPD GHYARETALK RQLLTELPAY YYQSLPGHKT 
AQWEVLEALL TNLCQFEPSQ FSLRTEGNRW HWSNNRLNEH TSFTFGDAGS LPLEPLDWVG
RQVQEDLILL DGPEASLVAG QLCFGNGWCL DEKIGLPFWQ IHAPITPIVE PMLRSAQKLM
ERLPAGRPVW RLNWSVKMSD QLDMTSRHTP ALDQLLTERA PSLTPETIAE CLYVRIERQT
LTRLPRSGAI LFGIHTYQNR LSDEVSKRPD AAERLTNVFK TTPQAMLDYK GMTPFMPALL
AYLTTASLVT TCPSA