Gene Slin_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1918 
Symbol 
ID8725655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2323852 
End bp2325219 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386762 
Protein GI284036832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.169156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGC AGGTCAGTAA CAACCTGATT AAGTATACAC GAACCGGCTG GCATTGGCTG 
GCCGGTTCTT TTTTGTGTTT ACTCAGCTCT TTTGCCTGGT CGCAGCCTAC CGACGAAACC
TTGCTTAACC GGTGCGGAGT CGTTGAACAC GAACGAATTC TACAGCAGCG AAACCCTAAC
CGATTGCGGC AACTTACTGA GTTGAATCAG CTGATTCAGA AGGCGCAAAC GGATGGCAGG
GCGCTTCGGC AGGCCGTAGA TGAAACGGTG TACCGGATTC CTGTAGTCGT TCACGTGGTG
CATAATAATG CATCGCAGAC CGTTGGCGGG GCTAATAACG GCAATATCTC TGAAGAGCAG
ATACTATCAC AAATTCAGGT ACTGAACGAA GACTATCGTC GGCAAGAGGG TACAAATGGG
TTCAATACCA GCGACATTGG CGCCGACGCA CGCATTGAGT TCTACCTGGC CACCACCGAT
CCGAGTGGTA ACCCATCTAA TGGAATCACC AGGCATTATT ATGCCCAAAA GTCGTCATTT
GATGTATTTA ATGACGACAT ATTGCTATCT CAGATTGCCT ACTGGCCCAG TAACCGATAT
CTAAATATTT GGGTCACCAA AGTCGACAAC TACATTGGTT ATACTCAGTT CCCCTCCGCA
GCTGACACAC TTAAAGGACT CCCCGCCAGT TCCAATGAGT TTACGGACGG CACGATCATT
GACTACCGCT ATTTTGGGAA GCGAACAGGA ACCGTTAGTA GTTCTTCCCT GTATGCGCTG
GGACGTACCG CAACGCACGA AATAGGGCAC TGGCTGGGAC TAATTCATAC CTGGGGAGAT
GGCAACGGCT GTGCTGAAGA TTATGTAGCT GATACCCCGC CTACAGAAGA TAGATCCAAT
GTTTCTGTAC TGACAAACTG CCGACAAACC TACTCCAGTT GCGTAAATGG CGTACAAACG
CGTGACCTGA TTGAAAACTA CATGAATTAT TGGCCCGATG CCTGTATGAA TATGTTTACA
GCGGGGCAGG TAGCACGCAT GCGGCTGGTC ATGACGTTGA GTCCCCGCAG GGCACAACTG
CTTAAGTCGG TACTTTCGCC ATTAACCGAA ACCGAGGCCC TTACGGTAAG CATTTGGCCA
AACCCAATCA CTACAGCAGA ATCTTCCATT GATGTACAGC TAAAAGGGTC TCAGACTTTC
AACCTTGATT TGTTTGATGC TACCGGTCGG CAGTTGAGAA GCTATACATA CACCAATTCG
CCCAGTACGC GGGTTAGTGT ACCCGTAACG GGATTGGCAA CTGGTGTGTA TATTGTGCGC
GTGAAAACCG GTAGTGAAAT GGTTAGCAAG CGCCTGCTGG TTCAGTAA
 
Protein sequence
MIKQVSNNLI KYTRTGWHWL AGSFLCLLSS FAWSQPTDET LLNRCGVVEH ERILQQRNPN 
RLRQLTELNQ LIQKAQTDGR ALRQAVDETV YRIPVVVHVV HNNASQTVGG ANNGNISEEQ
ILSQIQVLNE DYRRQEGTNG FNTSDIGADA RIEFYLATTD PSGNPSNGIT RHYYAQKSSF
DVFNDDILLS QIAYWPSNRY LNIWVTKVDN YIGYTQFPSA ADTLKGLPAS SNEFTDGTII
DYRYFGKRTG TVSSSSLYAL GRTATHEIGH WLGLIHTWGD GNGCAEDYVA DTPPTEDRSN
VSVLTNCRQT YSSCVNGVQT RDLIENYMNY WPDACMNMFT AGQVARMRLV MTLSPRRAQL
LKSVLSPLTE TEALTVSIWP NPITTAESSI DVQLKGSQTF NLDLFDATGR QLRSYTYTNS
PSTRVSVPVT GLATGVYIVR VKTGSEMVSK RLLVQ