Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1918 |
Symbol | |
ID | 8725655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2323852 |
End bp | 2325219 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386762 |
Protein GI | 284036832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.169156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAGC AGGTCAGTAA CAACCTGATT AAGTATACAC GAACCGGCTG GCATTGGCTG GCCGGTTCTT TTTTGTGTTT ACTCAGCTCT TTTGCCTGGT CGCAGCCTAC CGACGAAACC TTGCTTAACC GGTGCGGAGT CGTTGAACAC GAACGAATTC TACAGCAGCG AAACCCTAAC CGATTGCGGC AACTTACTGA GTTGAATCAG CTGATTCAGA AGGCGCAAAC GGATGGCAGG GCGCTTCGGC AGGCCGTAGA TGAAACGGTG TACCGGATTC CTGTAGTCGT TCACGTGGTG CATAATAATG CATCGCAGAC CGTTGGCGGG GCTAATAACG GCAATATCTC TGAAGAGCAG ATACTATCAC AAATTCAGGT ACTGAACGAA GACTATCGTC GGCAAGAGGG TACAAATGGG TTCAATACCA GCGACATTGG CGCCGACGCA CGCATTGAGT TCTACCTGGC CACCACCGAT CCGAGTGGTA ACCCATCTAA TGGAATCACC AGGCATTATT ATGCCCAAAA GTCGTCATTT GATGTATTTA ATGACGACAT ATTGCTATCT CAGATTGCCT ACTGGCCCAG TAACCGATAT CTAAATATTT GGGTCACCAA AGTCGACAAC TACATTGGTT ATACTCAGTT CCCCTCCGCA GCTGACACAC TTAAAGGACT CCCCGCCAGT TCCAATGAGT TTACGGACGG CACGATCATT GACTACCGCT ATTTTGGGAA GCGAACAGGA ACCGTTAGTA GTTCTTCCCT GTATGCGCTG GGACGTACCG CAACGCACGA AATAGGGCAC TGGCTGGGAC TAATTCATAC CTGGGGAGAT GGCAACGGCT GTGCTGAAGA TTATGTAGCT GATACCCCGC CTACAGAAGA TAGATCCAAT GTTTCTGTAC TGACAAACTG CCGACAAACC TACTCCAGTT GCGTAAATGG CGTACAAACG CGTGACCTGA TTGAAAACTA CATGAATTAT TGGCCCGATG CCTGTATGAA TATGTTTACA GCGGGGCAGG TAGCACGCAT GCGGCTGGTC ATGACGTTGA GTCCCCGCAG GGCACAACTG CTTAAGTCGG TACTTTCGCC ATTAACCGAA ACCGAGGCCC TTACGGTAAG CATTTGGCCA AACCCAATCA CTACAGCAGA ATCTTCCATT GATGTACAGC TAAAAGGGTC TCAGACTTTC AACCTTGATT TGTTTGATGC TACCGGTCGG CAGTTGAGAA GCTATACATA CACCAATTCG CCCAGTACGC GGGTTAGTGT ACCCGTAACG GGATTGGCAA CTGGTGTGTA TATTGTGCGC GTGAAAACCG GTAGTGAAAT GGTTAGCAAG CGCCTGCTGG TTCAGTAA
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Protein sequence | MIKQVSNNLI KYTRTGWHWL AGSFLCLLSS FAWSQPTDET LLNRCGVVEH ERILQQRNPN RLRQLTELNQ LIQKAQTDGR ALRQAVDETV YRIPVVVHVV HNNASQTVGG ANNGNISEEQ ILSQIQVLNE DYRRQEGTNG FNTSDIGADA RIEFYLATTD PSGNPSNGIT RHYYAQKSSF DVFNDDILLS QIAYWPSNRY LNIWVTKVDN YIGYTQFPSA ADTLKGLPAS SNEFTDGTII DYRYFGKRTG TVSSSSLYAL GRTATHEIGH WLGLIHTWGD GNGCAEDYVA DTPPTEDRSN VSVLTNCRQT YSSCVNGVQT RDLIENYMNY WPDACMNMFT AGQVARMRLV MTLSPRRAQL LKSVLSPLTE TEALTVSIWP NPITTAESSI DVQLKGSQTF NLDLFDATGR QLRSYTYTNS PSTRVSVPVT GLATGVYIVR VKTGSEMVSK RLLVQ
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