Gene Slin_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1914 
Symbol 
ID8725651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2318587 
End bp2319798 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content49% 
IMG OID 
Productaminotransferase class I and II 
Protein accessionYP_003386758 
Protein GI284036828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAC TTAAAAGTGA TCGGTTAACA CACCTCAAAT ACGACATTCG GGGCCCGATT 
TATGAAAAAT CCCTCGAACT TGAGAGTCAG GGTTACAAAA TTATCAGCCT TAATATTGGC
AATCCGGCCA CGTTCGGTTT CGACGCGCCC GACGAAATTG TCCATGACAT TATTCTCAAT
ATCCGTAATG CGCAGGGCTA TTCCGACTCA AGGGGGCTTT TTGCGGCACG TAAAGCCGTT
ATGCACCATA CGCAGAATAT TGGCTTGCCC GGTATTGCCA TCAACGACAT CTATATTGGC
AATGGTGTAA GCGAACTGAT TATGCTGTCG ATGCAGGCGC TTCTCAATGA GGGAGACGAA
GTGCTGGTGC CCTCACCCGA CTACCCACTC TGGACAGCTT CGGTAGCTTT CTGTGGCGGT
AAACCGGTTC ATTACATTTG CGACGAAGCG GCCGACTGGA ATCCAGACCT GGCTGATCTG
GAGCGAAAAA TTACTCCCCG TACACGCGCC ATCGTTGTCA TAAACCCGAA CAACCCGACG
GGGGCCGTGT ACGAAAAATC GGTACTGGAA GGTATTGCCA GAATTGCCGA GAAACATAAA
CTCATCGTCT TTTCGGATGA GATTTATGAC CGTATTCTGT ATGATGAAGC CATTCATTAC
CCGATTTCCA AAATGATACA CGAAACGCTC TGTATCACGA TGGGGGGCTT ATCAAAAAAC
TACCGGGCGG CCGGTTTCCG GGGTGGCTGG ATGATCCTAA GCGGGGCACG GCACCGGGCT
AAATCGTACA TTGAGGGGTT AACATTACTG GCCAGTATGC GCCTTTGTGC CAATGTACCC
ACGCAGTTTG CCATTCAAAC GGCCTTGGGC GGGTACCAGA GTATCAATGA TCTGGTAATG
CCAACCGGGC GTCTGCATAA GCAAATGATG ATGGCTTATG ACCGTATGAC CGCTATTCCG
GGTATCAGCT GCGTAAAGCC CAAAGGAGCT TTGTACATTT TTCCAAAGAT TGATTTAACC
CAGTTTGACC TGATCGACGA TAACGACTTC GTGCTGAACC TGCTCATTGA ACAGAAAGTG
CTGGTTGTGG CGGGAAATGG CTTTAACTAC AGTCAAAACG ACCATTTTCG TATCGTTTGC
TTGCCAACTC TCGATGAGTT GACCGTAGCT ATGGATCGTA TTGAGCACTT CCTTGAAAGT
CGCCGGAAAT AA
 
Protein sequence
MEILKSDRLT HLKYDIRGPI YEKSLELESQ GYKIISLNIG NPATFGFDAP DEIVHDIILN 
IRNAQGYSDS RGLFAARKAV MHHTQNIGLP GIAINDIYIG NGVSELIMLS MQALLNEGDE
VLVPSPDYPL WTASVAFCGG KPVHYICDEA ADWNPDLADL ERKITPRTRA IVVINPNNPT
GAVYEKSVLE GIARIAEKHK LIVFSDEIYD RILYDEAIHY PISKMIHETL CITMGGLSKN
YRAAGFRGGW MILSGARHRA KSYIEGLTLL ASMRLCANVP TQFAIQTALG GYQSINDLVM
PTGRLHKQMM MAYDRMTAIP GISCVKPKGA LYIFPKIDLT QFDLIDDNDF VLNLLIEQKV
LVVAGNGFNY SQNDHFRIVC LPTLDELTVA MDRIEHFLES RRK