Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1914 |
Symbol | |
ID | 8725651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2318587 |
End bp | 2319798 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | aminotransferase class I and II |
Protein accession | YP_003386758 |
Protein GI | 284036828 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAATAC TTAAAAGTGA TCGGTTAACA CACCTCAAAT ACGACATTCG GGGCCCGATT TATGAAAAAT CCCTCGAACT TGAGAGTCAG GGTTACAAAA TTATCAGCCT TAATATTGGC AATCCGGCCA CGTTCGGTTT CGACGCGCCC GACGAAATTG TCCATGACAT TATTCTCAAT ATCCGTAATG CGCAGGGCTA TTCCGACTCA AGGGGGCTTT TTGCGGCACG TAAAGCCGTT ATGCACCATA CGCAGAATAT TGGCTTGCCC GGTATTGCCA TCAACGACAT CTATATTGGC AATGGTGTAA GCGAACTGAT TATGCTGTCG ATGCAGGCGC TTCTCAATGA GGGAGACGAA GTGCTGGTGC CCTCACCCGA CTACCCACTC TGGACAGCTT CGGTAGCTTT CTGTGGCGGT AAACCGGTTC ATTACATTTG CGACGAAGCG GCCGACTGGA ATCCAGACCT GGCTGATCTG GAGCGAAAAA TTACTCCCCG TACACGCGCC ATCGTTGTCA TAAACCCGAA CAACCCGACG GGGGCCGTGT ACGAAAAATC GGTACTGGAA GGTATTGCCA GAATTGCCGA GAAACATAAA CTCATCGTCT TTTCGGATGA GATTTATGAC CGTATTCTGT ATGATGAAGC CATTCATTAC CCGATTTCCA AAATGATACA CGAAACGCTC TGTATCACGA TGGGGGGCTT ATCAAAAAAC TACCGGGCGG CCGGTTTCCG GGGTGGCTGG ATGATCCTAA GCGGGGCACG GCACCGGGCT AAATCGTACA TTGAGGGGTT AACATTACTG GCCAGTATGC GCCTTTGTGC CAATGTACCC ACGCAGTTTG CCATTCAAAC GGCCTTGGGC GGGTACCAGA GTATCAATGA TCTGGTAATG CCAACCGGGC GTCTGCATAA GCAAATGATG ATGGCTTATG ACCGTATGAC CGCTATTCCG GGTATCAGCT GCGTAAAGCC CAAAGGAGCT TTGTACATTT TTCCAAAGAT TGATTTAACC CAGTTTGACC TGATCGACGA TAACGACTTC GTGCTGAACC TGCTCATTGA ACAGAAAGTG CTGGTTGTGG CGGGAAATGG CTTTAACTAC AGTCAAAACG ACCATTTTCG TATCGTTTGC TTGCCAACTC TCGATGAGTT GACCGTAGCT ATGGATCGTA TTGAGCACTT CCTTGAAAGT CGCCGGAAAT AA
|
Protein sequence | MEILKSDRLT HLKYDIRGPI YEKSLELESQ GYKIISLNIG NPATFGFDAP DEIVHDIILN IRNAQGYSDS RGLFAARKAV MHHTQNIGLP GIAINDIYIG NGVSELIMLS MQALLNEGDE VLVPSPDYPL WTASVAFCGG KPVHYICDEA ADWNPDLADL ERKITPRTRA IVVINPNNPT GAVYEKSVLE GIARIAEKHK LIVFSDEIYD RILYDEAIHY PISKMIHETL CITMGGLSKN YRAAGFRGGW MILSGARHRA KSYIEGLTLL ASMRLCANVP TQFAIQTALG GYQSINDLVM PTGRLHKQMM MAYDRMTAIP GISCVKPKGA LYIFPKIDLT QFDLIDDNDF VLNLLIEQKV LVVAGNGFNY SQNDHFRIVC LPTLDELTVA MDRIEHFLES RRK
|
| |