| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1911 |
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| Symbol | |
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| ID | 8725648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2312400 |
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| End bp | 2315594 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003386755 |
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| Protein GI | 284036825 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.420637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA ACTACTATGT ACGTTGGGGA TCCCATCTGC TGTGGATTAC CTTACTACTG
ATCCACACAG CAGTTTTAGC CCAGGACCGT ACCATTACCG GGCGTATCAC GTCTAAAGGA
GAGGGCAGTG CACTTCCCGG TGTGAACGTT TCGATTAAAG GCACTTCACG CGGAGTTGTT
AGTGACGCCA ACGGTGGATA CAGTATTGTA GCTCCTCCCA GAACTACGCT TGTTTATTCA
TTCATTGGAT TCAAAGCGCA GGAAGTGGTT GTCGGGAATC AGTCCGTAAT TAACGTGACC
CTGTCGGAAG ATGTCTCCAC ACTCAATGAA GTTGTTGTTA CGGGCTATAG TGCCCAGTCA
AAACGGGACA TCACCGGAGC CGTTTCGACT GTGAATACCA AAGAACTGCT GTCGATCCCG
GCAACGGACG TAGCCCAGCA GTTGCAGGGC CGTGTAGCTG GGGTAACGGT AACGAACGAT
GCTACGCCGG GCGGTTCGGC CACGGTACGG ATTCGTGGAT TTGGTACGAT TGGTAACAAC
GACCCACTCT ACATTATTGA TGGTGTTCCA ACCCAAAATC TTGGCACCAT CAACCAGAAT
GATATTGAGA CCATTCAGGT ACTTAAAGAC GCTTCAGCCT CGTCTATATA TGGTTCCAGA
GCGGCCAATG GCGTTGTGAT CGTAACGACC AAAAAAGGGA AAGCCGGTGT ATCGCGGATC
ACGTTCGATG CCTATTATGG GTCGCAGCAG TGGGCCAAAA AAGGGGAAGT CCTCAACGCT
ACTGAACTGG GCCAGTACTT ATATCTGGCC GATGTTAACG CAGGTAAGGT CCCGTCACAC
GGGCAGTATA CGTATGGTGC TAACGGGCAG GTAACCATCC CAGCCTATGT ATTCCCCAGT
AAAGGAGCAG AAGGTACAGC AGCGGTTGAT CCGAGCAAAT ACTCTCTCAC TCCAGACAAT
ATTTACGCGA TCACCCGCTC GGCCAATACA AACTGGTTCG ATGAAGTTTC TCGGACAGCT
CCTATCCAAA ACTATCAGCT TGGCGCATCT GGAGGCTCAG AAACGGGCCG TTATGCCTTA
TCGGTTGGCT ATTTCAACCA GCAGGGAACT GTTAGGGATA TCAGCTACGA TCGCTACTCT
ATCCGGGCTA ACACGGAGTT CAATGTTAAA AAACGTATTC GTGTTGGCGA AAACCTGACA
GCCGCTTACA GCAGCCGTAA AGGAGGTTTT AACAACAACG AGGAACAGAA CGCAGTATCC
GGTGCCTACA AGCACCATCC ACTACTTCCT GTTTACGATA TCGCCGGAAA CTTTGCCGGT
AGCCGGGGAC TTAACCTGGG TAACAACTCC AATCCGGTAG CTACGCTGTT CCGTGAACGC
GATAACCGGT ATAACAGCCT TCGCGTATTT GGTAATGCGT ATGCTGAAGT CGACATCATC
GAAGGCCTGA CGGCTCGTAC ATCGATGGGT CTCGATGCCA ACGGAGACCG CGCCAAATAT
TTGGGACGGG CAAACCCGGA ATATATAGAG GGTAGCTTCA ACAACAGCCT GACCGACCAG
AACCGCTACT TCTACCAGTG GGTATGGACC AACACGCTGA ACTACTCCAA GACGTTCAAG
AACGTTCATA AAGTAGATGC TTTTGTTGGT ACCGAAGCCA TCCGTCAGTA TCAGGAATTC
TTCGGAGCCG CTCGCAGTGG CTACTTCACT GAGCAGAAAG ACATTCAAAG CTACCTTGAC
CTGGGTACGC AGTCATCAGC CAGCAACGAA GGACGCATTG AGCAGGATTA CTCCCTGTTC
TCGGTCTTCG GTAAACTGAA CTACGCTTAT AGCGACAAAT ACCTGTTTCA GGCCATTATT
CGCCAGGACA AGTCGTCACG CTTTCTGTCG GCTTCGAACA GTGCTCTGTT CCCGGCTGTG
TCAGCGGGCT GGCGTATCTC GCAGGAAGAT TTCTTTAAGA ACAACCTGAC ATTCGTAAGC
GATATGAAAC TGCGGGCAGG TTGGGGTAAA ACAGGAAACC AAGCCATCGG AGATTACAAC
GCCTATACTA CCTATCGTTC CAATACCTCA ACGAACGGCT ATCCGATTGA CGGAAGCATG
TCGACAGCAA CAGCCGGTTT CAGCCCACAG CGTTTTGGCA ACCCGAATGC TAAATGGGAA
GCTACAGCTT CGACCAACTT TGGTTTCGAC CTGGCCATGC TGTCGAACAA GTTGGATGTG
AGCTTCGATG TGTGGAGCCG GAAAACGACC GATATGCTCT TCACCTCACC GTTTACGTTC
ACTGCGGGCG ATGCAGATAT TCCGGCTTAT AACGTAGGTA GTATGCAAAA CCGGGGTATT
GACCTCGCTA TTGGCTACAA GGATCGCAAA GGTGATTTCC GTTATGGTGC CAGCATCAAC
TTCGCTACGT ATCGCAACAA AGTATTGAAA CTGGATGAAA GCGAGAATAC CCGTTACTTC
GGTTATGGCT CGCGCGTTCC GGCGGTTACT CTGACACAGG CCGGACTCCC CATTTCATCG
TTCTTTGGCT ACAAGGTACT TGGTATCTTC CAGACAGCCG AAGAAGCAAA AGCCTGGGCT
CCCTATGGTG ATTACAATGC TGTCGGTAAA TTCAAAATGG CCGATATCAA TGGTGACGGC
AAAATTGATG ATGCGGACCG AACCATCATC GGTAACCCCC ACCCCGATTT CACCTATGGC
ATAAATGTGA ACCTTGGTTA TAAAAACTTC GATCTGACCA TCTTTGGTAA CGGATCCCAG
GGCAACGACA TTTATAACTA CACCCGTTAT TTTACGGATT TCAACACCTT CCAGGGTAAC
CGTTCACGTC GGGCGTTATA CGATGCCTGG TCGAAAACGA ACCCAGGTGG CACAGTACCC
GTCCCGGATG CCAACGACCA GATCAGCAGC CGTCCCTCCT CTTACTTCAT TGAGGATGGT
TCATACTTCC GGATCAAAAA CGTTCAGTTG GGCTATACCC TGCCAGCCAG TTTGCTCTCC
AAACTGGGCT TAGCTTCCTG CCAGATCTAT GTGCAGAGCC AGAACCTGCT CACATTCACC
AAATATCAGG GACTCAACCC GGAGATTAGC ATTTCGAACA ACTACAATAG CGACAAAAAC
CGGAACCTCG GCTTCGACGG CGGTTACCTG CCCGCTTCCC GTACGCTGCT TTTTGGCCTA
AGTGTTGGAT TTTAA
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| Protein sequence | MKNNYYVRWG SHLLWITLLL IHTAVLAQDR TITGRITSKG EGSALPGVNV SIKGTSRGVV
SDANGGYSIV APPRTTLVYS FIGFKAQEVV VGNQSVINVT LSEDVSTLNE VVVTGYSAQS
KRDITGAVST VNTKELLSIP ATDVAQQLQG RVAGVTVTND ATPGGSATVR IRGFGTIGNN
DPLYIIDGVP TQNLGTINQN DIETIQVLKD ASASSIYGSR AANGVVIVTT KKGKAGVSRI
TFDAYYGSQQ WAKKGEVLNA TELGQYLYLA DVNAGKVPSH GQYTYGANGQ VTIPAYVFPS
KGAEGTAAVD PSKYSLTPDN IYAITRSANT NWFDEVSRTA PIQNYQLGAS GGSETGRYAL
SVGYFNQQGT VRDISYDRYS IRANTEFNVK KRIRVGENLT AAYSSRKGGF NNNEEQNAVS
GAYKHHPLLP VYDIAGNFAG SRGLNLGNNS NPVATLFRER DNRYNSLRVF GNAYAEVDII
EGLTARTSMG LDANGDRAKY LGRANPEYIE GSFNNSLTDQ NRYFYQWVWT NTLNYSKTFK
NVHKVDAFVG TEAIRQYQEF FGAARSGYFT EQKDIQSYLD LGTQSSASNE GRIEQDYSLF
SVFGKLNYAY SDKYLFQAII RQDKSSRFLS ASNSALFPAV SAGWRISQED FFKNNLTFVS
DMKLRAGWGK TGNQAIGDYN AYTTYRSNTS TNGYPIDGSM STATAGFSPQ RFGNPNAKWE
ATASTNFGFD LAMLSNKLDV SFDVWSRKTT DMLFTSPFTF TAGDADIPAY NVGSMQNRGI
DLAIGYKDRK GDFRYGASIN FATYRNKVLK LDESENTRYF GYGSRVPAVT LTQAGLPISS
FFGYKVLGIF QTAEEAKAWA PYGDYNAVGK FKMADINGDG KIDDADRTII GNPHPDFTYG
INVNLGYKNF DLTIFGNGSQ GNDIYNYTRY FTDFNTFQGN RSRRALYDAW SKTNPGGTVP
VPDANDQISS RPSSYFIEDG SYFRIKNVQL GYTLPASLLS KLGLASCQIY VQSQNLLTFT
KYQGLNPEIS ISNNYNSDKN RNLGFDGGYL PASRTLLFGL SVGF
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