Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1908 |
Symbol | |
ID | 8725645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2308868 |
End bp | 2309485 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | isochorismatase hydrolase |
Protein accession | YP_003386752 |
Protein GI | 284036822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.460102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCA AAAACGCTGA CTTACACGGT AACGCTCCCG ATTCGTCGCC AGTTGCGCTG CTGATCATCG ATATGATCAA CGATCTGGAA TTTCCGGGCG GAGATGAGCT TCTGGAGCCT GCCAGCCGGA TCGCTGACAG GATTTCAGAA CTGAAACAAC GCGCCAAAGA ACAGAGTATT CCGATCATTT ATGCCAATGA TAACTTTGGC AAGTGGCGCT CTGATTTCAA TGAAGTCGTT GAGCACGTGT TGACCGACGG AGTCAAAGGA AAATACCTGG CGGAAGTTCT CAAGCCTGAT AAAGACGATT ATTTTGTGCT GAAGCCCAAG AACTCGGCCT TCTACGAAAC TACTCTGGAC ATGCTGCTCA CCTACCTACA AGTGAAACAT GTCGTTATAA CTGGCTTAAG CACCGACTCC TGCGTACTTT TTTCAGCCAA TGATGCCTAT ATGCGCGATC TGAAAATTTC GATCCCAGCC GATTGCGTGG CGTCGATCAA CCCCGCCCAT ACAGACGATG CACTGGCTTA TATGAAGCGA GTACTTAGTG CCGACATTAG CCCCTCTGCC GAAGTTGATC TGGCTTCCCT CCGCCAGGAA TTAGCCAGTG TTGATTAG
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Protein sequence | MDTKNADLHG NAPDSSPVAL LIIDMINDLE FPGGDELLEP ASRIADRISE LKQRAKEQSI PIIYANDNFG KWRSDFNEVV EHVLTDGVKG KYLAEVLKPD KDDYFVLKPK NSAFYETTLD MLLTYLQVKH VVITGLSTDS CVLFSANDAY MRDLKISIPA DCVASINPAH TDDALAYMKR VLSADISPSA EVDLASLRQE LASVD
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