Gene Slin_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1908 
Symbol 
ID8725645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2308868 
End bp2309485 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003386752 
Protein GI284036822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.460102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA AAAACGCTGA CTTACACGGT AACGCTCCCG ATTCGTCGCC AGTTGCGCTG 
CTGATCATCG ATATGATCAA CGATCTGGAA TTTCCGGGCG GAGATGAGCT TCTGGAGCCT
GCCAGCCGGA TCGCTGACAG GATTTCAGAA CTGAAACAAC GCGCCAAAGA ACAGAGTATT
CCGATCATTT ATGCCAATGA TAACTTTGGC AAGTGGCGCT CTGATTTCAA TGAAGTCGTT
GAGCACGTGT TGACCGACGG AGTCAAAGGA AAATACCTGG CGGAAGTTCT CAAGCCTGAT
AAAGACGATT ATTTTGTGCT GAAGCCCAAG AACTCGGCCT TCTACGAAAC TACTCTGGAC
ATGCTGCTCA CCTACCTACA AGTGAAACAT GTCGTTATAA CTGGCTTAAG CACCGACTCC
TGCGTACTTT TTTCAGCCAA TGATGCCTAT ATGCGCGATC TGAAAATTTC GATCCCAGCC
GATTGCGTGG CGTCGATCAA CCCCGCCCAT ACAGACGATG CACTGGCTTA TATGAAGCGA
GTACTTAGTG CCGACATTAG CCCCTCTGCC GAAGTTGATC TGGCTTCCCT CCGCCAGGAA
TTAGCCAGTG TTGATTAG
 
Protein sequence
MDTKNADLHG NAPDSSPVAL LIIDMINDLE FPGGDELLEP ASRIADRISE LKQRAKEQSI 
PIIYANDNFG KWRSDFNEVV EHVLTDGVKG KYLAEVLKPD KDDYFVLKPK NSAFYETTLD
MLLTYLQVKH VVITGLSTDS CVLFSANDAY MRDLKISIPA DCVASINPAH TDDALAYMKR
VLSADISPSA EVDLASLRQE LASVD