| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1903 |
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| Symbol | |
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| ID | 8725640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2299719 |
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| End bp | 2302475 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_003386747 |
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| Protein GI | 284036817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.602156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.263579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCAC TTCTAAATTA TCTTACGCTC GGTGGTGCTG TGGTTAGCGT CTTAGGGTTG
CTGGGGAGTG AGTCTGGTAA ACTGAGCCAA CCTGCCTCAA AAGCTGGAAT GGCGCAGGTC
GACACGACGA AGCGGCCGGA GGAAAATCGC TTTACCAAAA CGGTTCTGTC CAACGACCTG
AACGAGCCTA TGGAACTGGC CGTTGCTCCC GATGGCCGGG TGTTCTTCGT TGAACGGGGC
GGGAAGTTTT ACATGTACGA CCCGGCGCAG AAGAAAACCC GGTTGCTCTA TGACTTTCCG
GTTAAAGCCG TCGAGAAGTA CCTGAATGGG CTGCTTGGCA TGACCATCGA TCCGAATTTC
AGCCAAAACC ATTACCTGTA TTTCTTTTAC ACCATACAGG ATAAAGACCA GACAAGGCAG
CGGATCGCCC GGTTCGTGAT GAACAACGAT AATACGCTCG ATATTGCCAG TGAAAAATCA
ATCATTGAAT TTCCGATTGA TCTCGAAGTG AGCGCGCATA CGGGTGGCTC GATGGCCTGG
GATACGCACG GCAACCTCTT TATTTCAACC GGCGATAACA CCGTACCCTT CGAATCGAAC
GGATTTGCGC CCATCGACGA GCGGGCTGGC AGACTAACGT TCGATGCGCA GCGGTCGGCG
GGGAATCCGA ACGATCTGCG GGGTAAAATC CTGCGGATTC ATGTTGAAGC CGACGGGTCT
TACACCATCC CGGAGGGGAA TCTGTTCCCG AAAGGAACCC CCGGAACACG CCCGGAAATT
TATGTGATGG GTTGCCGAAA TCCGTACCGT ATTTCGGTCG ATCCGGCTAC GTCCATCGTC
TACTGGGGCG AAATTGGGCC GGACTCCGGC ACCGACGGGC CACAGGGGCC ACGCGGATAC
GATGAGTTTA ATCAGGCAAA AAAAGCCGGC AACTACGGCT GGCCATATTT TGTGGGCGAT
AGCAAAGCGT ATCACCAGTA CGATTTCGCC AGTAAAAACG TTGGGTCGCT GTTCGACCCG
GCGGCACCGG TCAATAACTC ACCCAATAAT ACCGGTGCCA AACAACTCCC GCCAACGACC
AAAGCGATGG TGTGGTACCC GTATAACAAA TCGGACGAGT TTCCTGAACT GGGTCTTGGC
GGTCGTTGTG CCATGGGCGG GCCTGTATAT CATTACAACG CGGCACTCCA GTCGAAAACG
AAGATACCGG CTTATTACGA CAAAGCCCTG TTTATGTACG ACTGGATGCG GAACTGGGTC
TTTGCTGTGC GGCTTGACGA TCAGCAAAAT TTTCAGTCGA TGGAGCGGTT TATGCCCGCA
ACGGGCGACT TCCGGCGACC TGTCGATATG GAAATCGGCC CCGAAGGCTC CTTTTATATG
CTGGAATACG GGTCGGTTTA CGGCATCGAC AACGACGATG CACGGCTGGT TCGAATTGAT
TTCAATCCCG GCAACCGGAC ACCCGTAGCG AAAGTGGCCG CCATTGATAC GATTGGCCTG
GCTCCGTTAA CGGTCGCGTT TAAGAACAAG AGTTACGATT ACGACAAAAC GGACAAACTG
CGTTACCAAT GGCGATTTGA AGGTAATAAA GTAGCCTCGA CCGAAGCGAA CCCGACCTAC
ACCTTCCGCA AAAATGGGAT ATATAACGCC TTGCTGACCG TTACGGACCA ATCCGGGAAA
TCCAGCACCG ACACGCTGAC CATTAAAGTG GGTAACCGGA TGCCGCAGGT TACCATTGCT
ACCACGGACA ATAGTACCTT TTTCTTCCCG GATCAAACCC CACTCCGGTA TTCCGTAGCG
GTATCCGATC AGGAGGATAA AGTGATTGAC CGGAAAAAAG TAAACGTGGC GCTGACCTAC
ATTCCCAAAC TAGCCGGTAA CGACCAGCCG ATGGGCCACC AGCAAATTTC GGCTTCGTAT
AACCTGGGCA AGTCACTGAT TGCCGGGAGC GACTGCAAAG CCTGCCACCA GGTAGCTGCC
AAATCCGTTG GGCCATCTTT TACGGAAGTC GCCAAAAAAT ACCAGGGTGA TAAGACCGCT
ACCGCCAAAC TGGCCAATAA GATTATCATT GGGGGCGGTG GTGTGTGGGG TGAACATGCC
ATGAGTGCTC ATCCGCAGCT CTCGCGGGAG GAAACAACCG AAATGGTAAA ATATATTTTC
TCGCTGGCCA ATCAGCCCAC AGACAACCGG CTTCCGCAGC AGGGCAGTCT GGTCCTTAAA
GATCACGTCG GTAATGAAGC CCAGAGCCGG TATATCCTGA CCGCATCCTA TACCGACAAA
GGAAGTGTAG GAGCCCCTAT GCCGAAACTG GCACTTACGA AAAACGACGT GCTGGTGTTA
CGCCCGGCTA AAGTGCTCGG TGCCGAAGCT GATTCGGTCT ACAAAATGTC GAAGCAGGGC
CGACGGCTGG GGAACGCCAA ACATGCGTCG TACTTTGTAC TGAAAGGCAT CGACCTGAAA
GACATTGACC AACTCACCTA TCACTATTCG TCGAAGGACG AAACGGCCAC GATCAATGTT
CATACCGATT CGCCAACGGG GCCGGTGATC AGCACACTGA ACTACGCGCC AACGGGCGAA
TGGAGAAACT ACTCGGATGC GAGTACCCCC ATCCAGAATC CGGGCGGTAA GCACGATCTG
TATTTTGTGT TCGACAAGCC CGGCAGCCCT GATAAGCCGC TTATTTCGCT GGAATGGCTC
CAGTTTAAAC GCAAAGAGAT GGCTGCGAGC GCCGTTAATA AAACCTCTGG AAAATAA
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| Protein sequence | MFPLLNYLTL GGAVVSVLGL LGSESGKLSQ PASKAGMAQV DTTKRPEENR FTKTVLSNDL
NEPMELAVAP DGRVFFVERG GKFYMYDPAQ KKTRLLYDFP VKAVEKYLNG LLGMTIDPNF
SQNHYLYFFY TIQDKDQTRQ RIARFVMNND NTLDIASEKS IIEFPIDLEV SAHTGGSMAW
DTHGNLFIST GDNTVPFESN GFAPIDERAG RLTFDAQRSA GNPNDLRGKI LRIHVEADGS
YTIPEGNLFP KGTPGTRPEI YVMGCRNPYR ISVDPATSIV YWGEIGPDSG TDGPQGPRGY
DEFNQAKKAG NYGWPYFVGD SKAYHQYDFA SKNVGSLFDP AAPVNNSPNN TGAKQLPPTT
KAMVWYPYNK SDEFPELGLG GRCAMGGPVY HYNAALQSKT KIPAYYDKAL FMYDWMRNWV
FAVRLDDQQN FQSMERFMPA TGDFRRPVDM EIGPEGSFYM LEYGSVYGID NDDARLVRID
FNPGNRTPVA KVAAIDTIGL APLTVAFKNK SYDYDKTDKL RYQWRFEGNK VASTEANPTY
TFRKNGIYNA LLTVTDQSGK SSTDTLTIKV GNRMPQVTIA TTDNSTFFFP DQTPLRYSVA
VSDQEDKVID RKKVNVALTY IPKLAGNDQP MGHQQISASY NLGKSLIAGS DCKACHQVAA
KSVGPSFTEV AKKYQGDKTA TAKLANKIII GGGGVWGEHA MSAHPQLSRE ETTEMVKYIF
SLANQPTDNR LPQQGSLVLK DHVGNEAQSR YILTASYTDK GSVGAPMPKL ALTKNDVLVL
RPAKVLGAEA DSVYKMSKQG RRLGNAKHAS YFVLKGIDLK DIDQLTYHYS SKDETATINV
HTDSPTGPVI STLNYAPTGE WRNYSDASTP IQNPGGKHDL YFVFDKPGSP DKPLISLEWL
QFKRKEMAAS AVNKTSGK
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