Gene Slin_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1897 
Symbol 
ID8725634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2293202 
End bp2294224 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386741 
Protein GI284036811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCA TTACCCGGAA AAAGCAAATT TATTCGATAG GTAACCAGTT GAGGGACTAC 
CTGGTTCAGT ACAATCGCGA ACACCGGTTG CCTATTCAGT ACGCCGACCT GCTTCGGTAC
GATAATTCGA TCGCGCTTTT CGATAAACGC GAACGCGACA CCCTTTGGGA AACTGTTTTT
TATCCGGCCT CCGAAGTGGA CGATATTCTG CTGGCGCTCA AAACGATTTA CGCCATCCTG
AAAGCCGACG GAGATATGTC GGTAACCGGG CATTTGACCA TCGACCGGGT TGATTTGTGC
TCCTACGGCA ATACAATGCC CTTTCGGGTA AGGGTTCGGA ATCTGGTAAA TGATAATTTT
GACTATTTCT ACATCAAAAA TGCCGACGCT TCCCGGATTT ATGGCCTTGA ACTGGAGCAT
ATTCTATCCC CTAATCGCAT CAGCTACCTG ACCAGCGGGC AGACGTTGAT CGAAGAACAC
ATTGCGGGTA TACCGGGCGA CATGTTCTTT GAGCAGCAAA TGCATGACCC CGACCGTAAC
CCGGTTCGGC TATGTAAAGA ATTTGTGAAG TTTAACGAGC GGTGCTTCGT GCGGCTGTTA
GGCGATATGC ATTCCAGCAA TTTTGTGGTG GACATCACGC CCGATTTTGA TGAAGTATAC
TACCGAATCC GGGCTATCGA CTTCGACCAG CAGTCGTACG AAGGGCGGAA ATCGGTGTAC
ATGCCGCAGT ATTACCGGCA AAATCAACCC ATCATCGACC TGGGCCGTGC CTGCCTGACG
CCCGAAAGTG TGCACCAATA CCAGGTTGAA GAGCGGTCAC TGGTGGCCGG GCGGCTTCGG
GTCGAGCAAA TACGGATTCA TGAGTTGATG GTTGCCATGC GACAGGATAA CCTTGCCCCG
GCGGGTAACG TAGAGCAGCT TCGCGAGGCC CTCAACCGGC ACTACCGTAC CCGAAATTTC
ACCAAATGCC GGACAATGGG CGATATCGTC TGGCAAAGTC TGGAAGTGGT AGCGGCTCAT
TGA
 
Protein sequence
MPIITRKKQI YSIGNQLRDY LVQYNREHRL PIQYADLLRY DNSIALFDKR ERDTLWETVF 
YPASEVDDIL LALKTIYAIL KADGDMSVTG HLTIDRVDLC SYGNTMPFRV RVRNLVNDNF
DYFYIKNADA SRIYGLELEH ILSPNRISYL TSGQTLIEEH IAGIPGDMFF EQQMHDPDRN
PVRLCKEFVK FNERCFVRLL GDMHSSNFVV DITPDFDEVY YRIRAIDFDQ QSYEGRKSVY
MPQYYRQNQP IIDLGRACLT PESVHQYQVE ERSLVAGRLR VEQIRIHELM VAMRQDNLAP
AGNVEQLREA LNRHYRTRNF TKCRTMGDIV WQSLEVVAAH