Gene Slin_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1894 
Symbol 
ID8725631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2290295 
End bp2291581 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content55% 
IMG OID 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_003386738 
Protein GI284036808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAA TCCTTCCTCT TACTACCCCC GAACAGGCCG TTTCGGCTAT CCAGTCCGGC 
AATCGTGTTT TCATCCATAG CGTTGCGCAA ACGCCCCACG TGCTGATAAA GGCTATGGTT
GGCCGGGCTA GTGAATTGAC CAATGTGGAA GTCTGCCATA TGCATACTGA AGGCCCCCTG
CCCTATCTGG ACAGCACCCT TCAGGCATCA TTCCGGCCAA ATTCATTCTT TATCGGGGCT
AATATGCGCA AGCAGCTTAA TCAGGGAATC GGCGATTACG TACCCGTGTT TCTGAGCGAG
ATTCCCCTTT TGTTCCGTCG CAATATTTTA CCCATCGACG TGGCACTCAT TCAGGTATCA
CCGCCGGATG TGCACGGCTA TTGTTCCCTG GGTCCATCGG TAGATATTTC CCTGGCGGCC
ATCCATGCAG CTAAATATGT AATTGCCCAG ATAAACCCGC GTGTGCCGCG AACCCACGGC
GACGGCCTGA TTCCCATCTC CATGCTGCAC GCGGCCGTGG AGGTCGATGA ACCCGTATAT
GAAGTGCTGC CCGGAGAGAT CAGCGCCGAC GACAGGAAAA TCGGGCAGTA TGTGGCCAGT
CTTGTCGAGG ATGGGGCTAC GCTTCAGTTA GGTATCGGCG GCATTCCCAA CGCTACCCTG
GCTGAACTTA TTCACCACAA AGGGCTGGGT ATTCATACTG AAATGTTCTC GGACGGGGTC
ATTGATCTGG TGGAGCGGGG TGTCATTACG GGCGAACACA AAACGGTGCT GCCTTACCGA
ATCGTTTCGG CCTTTGTAAT GGGCAGCCAG CGCGTGTATG ATTTTATCGA CGACAATCCA
GAGGTGGCCA TGAAACAGGC CAGTTTCACC AATGATACCG CTATCATCCG ACGGAACCCT
AAAGTCACGG CCATCAATTC AGCCATTGAG ATCGACCTGA CCGGGCAGGT TTGTGCCGAT
ACCATTGGCA CCTACCAGTA TTCGGGTGTT GGCGGACAGA TGGACTTTGT GCGGGGCGCA
TCGCTTTCAG AAGGTGGTAA ACCTATAATT GCGCTGCCCT CCACGACCAG TAAGGGCCTT
AGCAAAATTG TGCCCTTCCT GAAAGAGGGA GCAGGCGTAA CGACCACCCG CGCCCACGTT
CATTATATCG TTACGGAGTA CGGTATTGCC GACCTTTACG GGCAGAACCT GCGTCAGCGG
GCTCGGGCGC TTATCAACAT CGCCCACCCC GACCACCGGG AGGAGCTAGA CCGGCAGGCG
TTCGAGCGGT TCGGTAGGTT GTCCTAA
 
Protein sequence
MPSILPLTTP EQAVSAIQSG NRVFIHSVAQ TPHVLIKAMV GRASELTNVE VCHMHTEGPL 
PYLDSTLQAS FRPNSFFIGA NMRKQLNQGI GDYVPVFLSE IPLLFRRNIL PIDVALIQVS
PPDVHGYCSL GPSVDISLAA IHAAKYVIAQ INPRVPRTHG DGLIPISMLH AAVEVDEPVY
EVLPGEISAD DRKIGQYVAS LVEDGATLQL GIGGIPNATL AELIHHKGLG IHTEMFSDGV
IDLVERGVIT GEHKTVLPYR IVSAFVMGSQ RVYDFIDDNP EVAMKQASFT NDTAIIRRNP
KVTAINSAIE IDLTGQVCAD TIGTYQYSGV GGQMDFVRGA SLSEGGKPII ALPSTTSKGL
SKIVPFLKEG AGVTTTRAHV HYIVTEYGIA DLYGQNLRQR ARALINIAHP DHREELDRQA
FERFGRLS