| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1892 |
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| Symbol | |
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| ID | 8725629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2287098 |
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| End bp | 2287988 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003386736 |
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| Protein GI | 284036806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.866168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGT CCTCTAACAT TACGCGCCAA CAGTTTCTTA AGATGGGGGC TCTGGCAGCC
TCGGCGGCCT TTCTGCCGCA ACTGGATGTG TTCGCGGCTA CATCGAAAAA AGTTGGCTTA
CAGCTGTACA CGCTGCGTGA CCTGATGGCA AAAGACCCCG AAGGAACCCT GCGGAAAGTT
GCCCAGCTAG GCTATAAAGA AGTTGAACCC TTTGGGTATT CGGACGGGAA ATTCTTCGGT
AAAACACCCA AAGAGTTTGC AGCCCTGATA AAAGAGTTGG GAATGACAGC GCCCAGCGGT
CACTATACGA CTGGCAAAAC GATGCCCAAG ACAAAAGGAA CGCTGACGAA TGACTGGAAG
CGGGCCGTTG ACGATGCGGC TGCCATTGGT CAGAAATACA TGGTTTGCGC TTATCTGTTT
CCCGAAGAAC GTACCAAACT GGACGATTAT AAAGCATTTG CCGACCTGTT CAACAAATCG
GCCGAAGTTG TGAAGGCAGC CGGGATGCAG TTCTGCTACC ATAATCACGA CTTTGAGTTT
GTAGCACTTG ATGGAAAAAT ACCCTATGAT GTGTTGACGA GTGGTACCGA TAAAAATCTG
GTTAAACTCG AACTCGATTT GTACTGGGCT ACAAGGGCGG GTCAGGACCC CGTCGCGTTA
TTCAAAAAGC ACCCCGGCCG GTTCCCGCTC TGGCACGTGA AAGACATGGA AAAAACAGCG
GAAAAGGCCT TCGCACCGGT TGGTACTGGT TCTATTGACT TCCAGCGCAT TTTCGATGCC
AAGAAAACGG CGGGAATGAC CCACTACTTT GTGGAGCAGG ACGTTTGCAA ACTGCCACCA
CTTGAGTCAA TTGCCATTAG CATCAAAAAT ATTGACAAGC TGAAAGTATA A
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| Protein sequence | MNQSSNITRQ QFLKMGALAA SAAFLPQLDV FAATSKKVGL QLYTLRDLMA KDPEGTLRKV
AQLGYKEVEP FGYSDGKFFG KTPKEFAALI KELGMTAPSG HYTTGKTMPK TKGTLTNDWK
RAVDDAAAIG QKYMVCAYLF PEERTKLDDY KAFADLFNKS AEVVKAAGMQ FCYHNHDFEF
VALDGKIPYD VLTSGTDKNL VKLELDLYWA TRAGQDPVAL FKKHPGRFPL WHVKDMEKTA
EKAFAPVGTG SIDFQRIFDA KKTAGMTHYF VEQDVCKLPP LESIAISIKN IDKLKV
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