| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1891 |
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| Symbol | |
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| ID | 8725628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2285228 |
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| End bp | 2286940 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003386735 |
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| Protein GI | 284036805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.969458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATT TTAACATAGA TGCTCAGGCA CTCAATACCT ACGACGCTAT AGTCATTGGC
TCCGGTATCA GTGGGGGATG GGCCGCCAAA GAACTGACTG GCAAAGGGTT ACGTACGCTC
GTTCTCGAAC GGGGGCGGGA TGTCCGGCAT ATTACGGATT ATCCCACAAC CAACACCCAG
CCCTGGGAAT TTGAACACCG CAACCAACTC AAGCGGGAGG TTAAAGAGGC TAACCCCATC
ATCAGCAAGT GCTATGCGTT TTACGAAGGA ACCGAGCAGT TCTTCGTGAA AGATGCCGAG
CACCCCTATA TTCAGGAGAA ACCGTTCGAC TGGATTCGGG GCTATCAGGT AGGCGGTAAA
TCGCTGATGT GGGCGCGGCA AACGCAGCGG TGGAGCGACT TCGACTTTGA AGGCCCCGCC
CGCGATGGAT TCGCGGTCGA CTGGCCGATT CGCTATGCCG ATATTGCTCC CTGGTATAGT
TACGTAGAAC GGTTTGCCGG AATTTCGGGC AATAAAGACG GACTGGCGAC ATTGCCCGAT
GGCGAGTTTC TGCCCCCGCA CGAGTGGAAC TGTGTGGAAA AGCACTTCCA GAAAAAAGTT
GCCGGGAAGT ACAAAGACCG GCACGTCATC ATGGGTCGGG CGGCCCACAT CACCAAACCA
CAGCAGGTGC ATTACGATCA GGGGCGGGCG CAGTGCCAGC ACCGGACCAT CTGTGAGCGG
GGCTGTCCGT TTGGCGGCTA TTTCAGTAGT AACTCATCGA CAATTCCCTG GGCGGCTAAA
ACGGGGAAAA TGACCCTTCG GCCAAACTCG GTCGTGCATT CGATCATCTA TGATGAGAAA
AAGGGCCGCG CAACCGGGGT TCGGGTTGTT GACTCCCAAA CCAAGAAAAT GACCGAATAT
TATGCCCGGA TTATTTTCCT GAATGCTGCC GCGCTGAACT CCAATCTGGT GCTGCTGAAC
TCGACCTCCA GCCGGTTTCC CAATGGGCTG GGTAACGACA GCGGTGTGCT GGGTAAATAC
GCAGCCTTCC ACAACTACCG GGCGGGTATC TCGGCCGAAT ACGACGGTGA ACTTGATTCG
ACTACCGACG GGCGTAGACC GAACAGCCCA TATATTCCCC GTTTCCGCAA CGTACTGAAG
CAGGAAACAA ACTTCCTGCG TGGGTATGCG GCCGGTTTCT CGGCGGGGCG CAGTTCGTAC
TCGGATCAGA ATGCCATTGG TGCCGATCTG AAACATAACC TGCTTAACCC AAAACTCGGC
GGCTGGTATG TCGGCTCGCA CATGATGGGC GAAACCATCC CGAAAGAAAG CAACTACGTA
GCCCTCGACT CGTCGCAGAA AGACCCGTTT GGAATTCCGC AACTGAAGAT TTCCATCGCT
TATGATGATA ACGACGATAA GATGGTGAAA GATTATCAGG AGCAGCTTAC GGAAATGTTT
ACCGAAGCCG GTTTCAAGAA TATCCGCGTT CGGGATAGCC ACGCCAGCCC CGGCCTCGAC
ATTCACGAAA TGGGTGGCGT ACGGATGGGA AAAGACCCCA AAACGTCGAT GCTTAATAAG
TGGAATCAGC TGCATGCCGT TAAAAACGTG TTTGTAACGG ACGGCTCCTG TATGACCTCC
ACATCGACCC AAAACCCTTC GCTGACCTAC ATGGCGCTGA CGGCGCGTGC CGCCGATTAT
GCCGTGAAGG CAATGAAGAA GGGATTGGTA TAG
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| Protein sequence | MSYFNIDAQA LNTYDAIVIG SGISGGWAAK ELTGKGLRTL VLERGRDVRH ITDYPTTNTQ
PWEFEHRNQL KREVKEANPI ISKCYAFYEG TEQFFVKDAE HPYIQEKPFD WIRGYQVGGK
SLMWARQTQR WSDFDFEGPA RDGFAVDWPI RYADIAPWYS YVERFAGISG NKDGLATLPD
GEFLPPHEWN CVEKHFQKKV AGKYKDRHVI MGRAAHITKP QQVHYDQGRA QCQHRTICER
GCPFGGYFSS NSSTIPWAAK TGKMTLRPNS VVHSIIYDEK KGRATGVRVV DSQTKKMTEY
YARIIFLNAA ALNSNLVLLN STSSRFPNGL GNDSGVLGKY AAFHNYRAGI SAEYDGELDS
TTDGRRPNSP YIPRFRNVLK QETNFLRGYA AGFSAGRSSY SDQNAIGADL KHNLLNPKLG
GWYVGSHMMG ETIPKESNYV ALDSSQKDPF GIPQLKISIA YDDNDDKMVK DYQEQLTEMF
TEAGFKNIRV RDSHASPGLD IHEMGGVRMG KDPKTSMLNK WNQLHAVKNV FVTDGSCMTS
TSTQNPSLTY MALTARAADY AVKAMKKGLV
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