Gene Slin_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1886 
Symbol 
ID8725623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2280990 
End bp2281337 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386730 
Protein GI284036800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.486277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAG CTGGCCCATC GGTGAAAACT AACCTGGTAC GAAAAGGCTT GCTTCTGGTG 
TTGCTTATAC TGGCGGTTCT AACAGTCAGG CTTGTTTACC AGCGTATGCA TCCGTATACG
GTTGAGGTGT TTCAAACGGC TGGCGGCTGG GGCTATTCCA TAGTCACTAA CGGAGAGCTA
CTTATTCATC AGCCTACTAT TCCGGGTCAG CCCGGAATAG TAGGCTTTGC TTCCGAGGAC
GAAGCAAAGC GCGTTGGTGA GCGGGTAGCC GAGAAGATAC AACAGGATAA GGCCCTGCCT
ACCCTGACGA ATGACGAACT ACGCCGGTTG GGCGTAAAAA TTCCCTGA
 
Protein sequence
MKKAGPSVKT NLVRKGLLLV LLILAVLTVR LVYQRMHPYT VEVFQTAGGW GYSIVTNGEL 
LIHQPTIPGQ PGIVGFASED EAKRVGERVA EKIQQDKALP TLTNDELRRL GVKIP