| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1880 |
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| Symbol | |
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| ID | 8725617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2273201 |
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| End bp | 2275369 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | blue (type 1) copper domain protein |
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| Protein accession | YP_003386724 |
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| Protein GI | 284036794 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.459048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA ATCAACCAAC CATACATCAT TTTGCCAGAC TGGCCCTGTT GGCCGCTGGC
CTTGCCTGGT TCAGCCAACC GGCTGCCTGG GCGCAGATTC AGTCCAAAAC CGGGCTTCCC
GTTAGTTCCA GTAGTAAACA ACCGGCACCT GCCCCCAAAG GGCTGGCTAA AGTAGAAGCG
GACCCCGAAA AAGAAGACGA TTTTTATAAA CTCATTTCGC TGCCCGTTCC GGAAGATATT
ATTCTGGAAG TAGGAGGAAT GGTGACCCTG CCCGATGGCA ATCTGGCCGT TTGTACCCGC
CGGGGCGAAG TCTGGATTGT TTCGAATCCC TACATCAGCG GCTCAGTCCG ACCTACTTAC
AAGCGTTTTG CCTATGGCCT GCACGAGCCG CTGGGGCTGG CCTACAAGGA TGGCGACATC
TATGTAACCC AGCGCAGTGA AGTAACCCGC CTGCGCGATA CCGACCAGGA CGGACGGGCT
GATTCGTACG ATAAAATGTA CTCCTGGCCC TTATCGGGCA ATTACCACGA GTACTCTTAC
GGGCCCACCT TCCTGCCCAA CGGGAACATG CTGGTCACGC TGAACGTGGG CTGGAGCAAT
AGCCTCGGGC ATGGCGTAAG TCTGGTTCCC TGGCGCGGCT GGACGCTGGA AATTACCCCA
GATGGCAAGA TGATGCCGTT TGCGGCCGGG ATGCGCTCAC CGGCGGGCTA CGGTATGAAT
GCCGCCGGTG ACTTTTTCTA CACCGAAAAC CAGGGCGATT GGGTTGGATC GGGACGTATT
TCGCAGGTAG AGAAAGGCGA TTTTCTAGGT AATGCCGAGA GTTTGCGCTG GACAGGCCTG
CCGGGTTCGC CCCTTACCAT CAAGCCGCAG GACGTGCCCA ATACCGGCGA ACCGCTCTAT
GATGTGGCCA AACAGTTTAC GGCTCTGAAA GCTCCCGCCG TCTGGCTACC CCACGGTATT
CTGGGTATTT CGACCTCGGG CATGCTGCTG GATAACACCA AAGGGGGCTT CGGCCCGTTC
GAAAACCAAC TATTCGTAGG CGATCAGGGA CAGAGTATCG TATCCAGGGT TGATTTCGAG
AAAGTTAAGG GTAAATACCA GGGCGTCGTC TTTCCATTCC GCGAAGGTTT CTCGTCGGGG
GTGCTGCGGA TGGTGTGGGG CCACGATGCG TCCATGTTTG TGGGCATGAC AAGCCGTGGC
TGGTCATCGA CCGGGAAAGA ACTGTTCAGT TTGCAGCGTG TCGTCTGGAC GGGTAAGATG
CCGTTCGAGA TGAAAACGAT TCATGCCATG CCTGATGGGT TTGAGATAGA GTTCACCTCG
CCCGTCGATC AGGAGCTGGC CGCCGACCCC GCTTCGTACA AGATTACGGG CTTCAACTAC
AAATACCATG CTACCTACGG GAGTCCGGTA ATCAATCGGG CGGGTTGCCC GATTCGGGGG
GTTGTCGTCT CTAAAGATGG CCTAAAAGCC CGGCTGGTGG TTGATAGTCT GCGTTTGGGA
TATATCCACG AGATCACCAC CGCAGGTATT CGGTCAACCA CGGGAAGGAC GTTATTACAC
AACGTGGGGT ATTATACGCT GAACAACATT CCCGATGGCG AAAAGCTGGC AGTTGCCGCT
TTGCCCGCTA AACACGATCA TGCAGGTATG ATGACAGCCT CCACATCGGC GGCCCCACCG
GTTGGTCGTA AAACCCCTGG TTCCAAAGCG GTACCGGCAA AACCAACTGG TGTAGTAAAG
ACAGCGGGCA AAGCCATGGT TAAGCGGGTT ACGGAAATGC CTGCTTCCTG GGGCGAACCG
GACTATACCA TCAACATGGG TACCAAACCC GGTCTTAAAT TCTCAACCGA GCAGTTTCAG
GTAAAGGCCG GGAGCAAGGT GCGGGTTGTC TTCAATAACG AAGACGATAT GCTTCATAAC
TTCGTGGTCG TGACACCCGG TTCAGCCGTC CAGGTGGGCG AACTGGCCAT GAAACTCGGG
CTGGAAGGGC AGGAGAAAAA TTACATCCCG CAAACGGATA AAGTGCTGTA TCACACAAAT
CTGCTACAGC CCAACACCAA TGAATCAATC TATTTTATTG CTCCTGAGAA ACCCGGTGAT
TACATGTACG AATGCTCCGT TCCGGGGCAC TTTTACGTCA TGCAGGGAAC AATGAAAGTA
GTTAAGTAG
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| Protein sequence | MKRNQPTIHH FARLALLAAG LAWFSQPAAW AQIQSKTGLP VSSSSKQPAP APKGLAKVEA
DPEKEDDFYK LISLPVPEDI ILEVGGMVTL PDGNLAVCTR RGEVWIVSNP YISGSVRPTY
KRFAYGLHEP LGLAYKDGDI YVTQRSEVTR LRDTDQDGRA DSYDKMYSWP LSGNYHEYSY
GPTFLPNGNM LVTLNVGWSN SLGHGVSLVP WRGWTLEITP DGKMMPFAAG MRSPAGYGMN
AAGDFFYTEN QGDWVGSGRI SQVEKGDFLG NAESLRWTGL PGSPLTIKPQ DVPNTGEPLY
DVAKQFTALK APAVWLPHGI LGISTSGMLL DNTKGGFGPF ENQLFVGDQG QSIVSRVDFE
KVKGKYQGVV FPFREGFSSG VLRMVWGHDA SMFVGMTSRG WSSTGKELFS LQRVVWTGKM
PFEMKTIHAM PDGFEIEFTS PVDQELAADP ASYKITGFNY KYHATYGSPV INRAGCPIRG
VVVSKDGLKA RLVVDSLRLG YIHEITTAGI RSTTGRTLLH NVGYYTLNNI PDGEKLAVAA
LPAKHDHAGM MTASTSAAPP VGRKTPGSKA VPAKPTGVVK TAGKAMVKRV TEMPASWGEP
DYTINMGTKP GLKFSTEQFQ VKAGSKVRVV FNNEDDMLHN FVVVTPGSAV QVGELAMKLG
LEGQEKNYIP QTDKVLYHTN LLQPNTNESI YFIAPEKPGD YMYECSVPGH FYVMQGTMKV
VK
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