Gene Slin_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1876 
Symbol 
ID8725613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2265622 
End bp2266161 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRieske (2Fe-2S) iron-sulphur domain protein 
Protein accessionYP_003386720 
Protein GI284036790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0535614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGT ACGATTTTTT GAAATCGATG GGGTTTACGG GAGCAGCGCT GATGGCCGCG 
CTTACCTCCT GCGTCCATGA AGAAGATACG GTCGTTAATG CGCTGACACT GCCGGGTTCA
GAAGGTACGT CGGTTACCCC CCCAACCAGC ACAACCACAA CACCCGGCTC GGGCAGTACA
ACAACGCCGT CGACCACAAC AACCACGACC AGCGGTGTTG ACTTAAGCAC CATCAAGAAT
CGCCTGCTTA CGATCGATCT GGCCAGCACG GCCGCTTCGG CGCTTAAAAC CGTTGGTGGC
TATATTGCAC AAAGTGGCAT TGTGGTAGCT CAGGTAAGCG CCGGTGTTTA TGTAGCTGTC
ACACAAACGT GCAGCCATGA GCCTAAAAAG GCCATCATCT TTAACAAGAC AGAGTTCTAC
TGCACCCAGC ACGGTGCCCG TTTCGACCTG AACGGAGTCG GGAAAAACAG CTTCGGCAGC
CGGGGAATCG CCGTTTATAA AGTAGCCACC GACGGCAAAA CCCTGGTCGT TTATACGTAG
 
Protein sequence
MTRYDFLKSM GFTGAALMAA LTSCVHEEDT VVNALTLPGS EGTSVTPPTS TTTTPGSGST 
TTPSTTTTTT SGVDLSTIKN RLLTIDLAST AASALKTVGG YIAQSGIVVA QVSAGVYVAV
TQTCSHEPKK AIIFNKTEFY CTQHGARFDL NGVGKNSFGS RGIAVYKVAT DGKTLVVYT