Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1872 |
Symbol | |
ID | 8725609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2262723 |
End bp | 2263928 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386716 |
Protein GI | 284036786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.068493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TATGCATAAC CGTTGGCGTA CTGCTTAGTC TATTGCGTTC GGGCCACGCT CAGTCCGTAG AAAAACCAGC TTACGAAGCC CGGAAGTTAA GTATACAGGA AGTGAATCTG GTGTCGGGTT ACTATAACCA AAACGGGAAC AACTCAGCCG TTACGGGCGG TATTGGCTCC GAACAGTTAA CCGACTTTGC TCAATCCATC GACCTGGTCC TGAAGAGTAC CGACCGGCGG AATCGCCAGC ATACCCTGGC GTTTGACCTG AACATTGACC ACTATACTTC AGCCTCGTCG GATAAGATCG ACCCGCTTAC GGTTTCGTCG GCCTCCAAAA GCGACACTCA CATTTATCCG TCGGTTTCCT GGAGTGTGCA GAACAACGAC CGGCATACCA CGCATGGCGT CGCTCTCTCG TATTCGACGG AGTATGATTA CAAATCGTAC GGAATCAACC TGAGCTTTGC GAAAGCCTCC GCCGATAACA ACCGGGAGGT AAGTCTGAAA GCAGGGGCTT TTTTTGATAC TTGGGCAGTA ATTTTGCCTG CTGAGCTTAG ACCGGAAGGC TATGGCTCCG GTGCTCACAG GGATCATGAT CCCATTGATT ACAAGCCACG TAACTCGTAC AACGCCAGCC TATCGGTTTC GCAGATCATT AACAAGCGGC TCCAGATATT GCTGACGGTA GAACCCGCGT TTCAGCAGGG TTTACTGAGC ACGCCCTTTC ACCGGATTTA CTTTCAGGAC GGGGCAGAAA CGGTAGAACG ACTGCCGGGT AGCCGCCTGA AACTACCCAT CGGTGTCCGG GTGCATTATT TCCTGGGCGA CCAGGTTATT GTCCGGGCAT TCTATCGCTA TTACATTGAC GACTGGGGCA TGCAGGCACA TACGGTCAAC CTCGAAACAC CCATTAAACT CACGTCTTTC ATCTCAATCA GCCCCTTTTA CCGATTCAGT CATCAGACCG CCGTTCGGTA TTTCGCTCCT TATGGCGAGC ACCAGCTGAC GCAGAAGTAC TACACGAGTG ATTATGACAT CTCTGGATTC AACAGTCAAT TTTTAGGGAC CGGTGTTCGA ATGGCTCCAC CCAGTGGCTT GTTTGGAATT GGGCATTGGC AAAGCCTCGA ACTCCGCTAC GGCCATTATG TACGCAGTAC TGGCATGGTT GCAAATAGCG TAACCCTGCT GGCTAAACTT AAATAA
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Protein sequence | MKKICITVGV LLSLLRSGHA QSVEKPAYEA RKLSIQEVNL VSGYYNQNGN NSAVTGGIGS EQLTDFAQSI DLVLKSTDRR NRQHTLAFDL NIDHYTSASS DKIDPLTVSS ASKSDTHIYP SVSWSVQNND RHTTHGVALS YSTEYDYKSY GINLSFAKAS ADNNREVSLK AGAFFDTWAV ILPAELRPEG YGSGAHRDHD PIDYKPRNSY NASLSVSQII NKRLQILLTV EPAFQQGLLS TPFHRIYFQD GAETVERLPG SRLKLPIGVR VHYFLGDQVI VRAFYRYYID DWGMQAHTVN LETPIKLTSF ISISPFYRFS HQTAVRYFAP YGEHQLTQKY YTSDYDISGF NSQFLGTGVR MAPPSGLFGI GHWQSLELRY GHYVRSTGMV ANSVTLLAKL K
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