| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1871 |
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| Symbol | |
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| ID | 8725608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2260073 |
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| End bp | 2262457 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003386715 |
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| Protein GI | 284036785 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00897497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAT TTACGTTGCA ACGGCTTGTT TTGTTCATGA TTCTGGCGTT TCCGATGGCA
GCCAAGGGTA CTCACCAGGT TGGCGGGCAT ATTGAGATGA AAGCCTTAGG TAACGTTGCC
GGACATTATC GGATTACCGT TATCAATTAC CTCGAAGACG GTACGCGCGG GGCAGCCAAC
CAGTCGACTA TTGGTACGTT AGGCATTTTC CGAAAACGCG ATAATGCGCT AATGACGACC
TTTATGGTTC AGCAAACCGG TTCACGGGTT CCCATCGTTT ACGCCAATGG ATTTTGTGCA
GCCCAACGTA ACCTTAAATT CATTGTCCTG ACCTACGAAG CGGATATTCA GCTACCGCCT
GGTAACTACA CCGACACACA GGGATATTAC ATTTCCTATC AGACCCGTAA CCGAAATGCG
GGCATCAGCA ATATCAATGG ACCCAGCCAA ACGGGCTTTA CCTTTTATCT GGAGTTTCCG
GCTATTCAGC AGAATAATCA GTTTTTCGAG AACTCGTCCC CTCACTTCGG GCCCATTAAT
GGTGAATACA TCTGTTTAGG TGATGCCTTC ACCTTTCCTT TCGGCGGTAC AGACCCCGAT
GGCGATGAAC TCCGCTACTC CATGATTACC CCGCTAAACC AAAAGGGAGC TACCGGCCAA
AACGGGACAA CCAACCCTGT CTCCGCAGGT CCCTATCCCG ACATAACCTG GCTCGCAGGG
TATGACGCCA ACGATGCTAT TCCTGGAAAC CCAAGCCTTC GGATCGATTC GCAAACCGGC
GAACTATCGG TAACGGCTAC TCAACTGGGT TTATTTGTCT TTGCCATCAA CGTTGAAGAG
TATCGAAATG GGGTAAAAAT TGGCGAAGTA CGACGCGATT TTCAGTTTCT CGTGATCGAC
TGTCCTCCTC AGACAACACC CGACCCGGCC GTTCAGATCA AAAATTACCC CAAGCAACTA
ACCACCACCA TTTGCCAGGG CGACTCGGCG ATACTGATAG CCGCTGTGGA CCCCAACTGG
AATTACCAGT GGCGGAAGAA TGATATAAAT ATTGTAGGGG CTACGAATCC AACCCTGGCT
GTTCGGGAGT CCGGTCAGTA TTCCATTGTG GTTTCACAAA AAGCCGTTTG CAGCAAAGTC
GGAAATTCGG AAGTCATCAA GGTTGATGTG ATCGGGAGTG ATGCGCGAGT TTCGGCAACG
GGGCACTTAT GCGCCACAAC CGGTTCCATA AAACTGGTGG CCACGGGTGT TCCGGACGTT
ACTTACCAGT GGTATAAAGA TAATCAGCTA CTAAACGGCC AGATAACGGA TTCGCTTCGG
ACCCCGGATG CCGGTAAGTA CTGGGCCGTT CTTACGTACC GTACATTAGG ATGCAAAGCC
CGAACCGACA CGGCCGTTCT CGACCGCTCT GCCCCTGTTC TGCCCTCCAT AACCTCTTCA
TCCGGCTTCA ATCGGATATG CCCGAACAGT TCGCTTCCCC TTGTAGGCAG TGGTGGCTTA
TTGTATCGCT GGCAGAAAGA TGACACATCA ATCAGTAATA ACGAGTCTTC CCAATTGGTT
GCCAGTAGCC CGGGCACGTT TGTAGTCACG GCCACGGATA TATACGGGTG CGAAGGTACC
TCCAGCCCCG TAACCATCAC CAGCGTTACG CCGGTTGTAG TCACTCTCGA TTCTATTCCG
GGCGTTTGCG GCCCTAATAA TCCAGCGTAT ACGTTAACGG GGAACCCGCC GGGGGGCGAT
TTTGCCGGAG CCGGTATCGA AACCGATGCA TTCGTCCCTG AGCAGGCAGG CGTTGGCAAC
CATACCATTA CGTATACGGT GAAACCAGCC CCCGAATGTG CCGGGACGGT AGCTACCCGG
ATCGCCGTAG TCGCCCCCAT TCCTACCATT CAGCTAGCCG ACTCACTAAC GACCTATCGG
GGTAACACCT TTTCCCTGAA TCCCGTGTAC ACCGGCGACC CCGTTCAGTT CCAGTGGACA
TCGGCTACGT ATCTGGATAA CCCAACTGCC GCCAACCCAA CCATCGCGGA TATCGCCGAC
GACATCACGT ACACGGTCGA TGCAACCAAC AGCACCGGCT GCGCCGTAAA AGACACTATT
CATATCACTG TTTTTGCCCG GGCCTGGGTA CCCGACGCTT TTTCACCCAA TGGTGACGGA
CAAAATGATG TTCTGGAACT GCCTGGTATT GCGGCTTTCC CCGATGCGGT CTTTACGCTG
TTCAATCGTT GGGGCGAAGT CGTTTATTCG TCCGGCAAAG GGTACACCAA TCCATTCGAT
GGAACACTGA ACGGAACGGC CCTACCAACG GGAGTTTATG CATACACTCT ATATACAGCC
CCCGAAAAAC CCGTCACACG CGGCCGAATC TTACTTGTTC GCTGA
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| Protein sequence | MHIFTLQRLV LFMILAFPMA AKGTHQVGGH IEMKALGNVA GHYRITVINY LEDGTRGAAN
QSTIGTLGIF RKRDNALMTT FMVQQTGSRV PIVYANGFCA AQRNLKFIVL TYEADIQLPP
GNYTDTQGYY ISYQTRNRNA GISNINGPSQ TGFTFYLEFP AIQQNNQFFE NSSPHFGPIN
GEYICLGDAF TFPFGGTDPD GDELRYSMIT PLNQKGATGQ NGTTNPVSAG PYPDITWLAG
YDANDAIPGN PSLRIDSQTG ELSVTATQLG LFVFAINVEE YRNGVKIGEV RRDFQFLVID
CPPQTTPDPA VQIKNYPKQL TTTICQGDSA ILIAAVDPNW NYQWRKNDIN IVGATNPTLA
VRESGQYSIV VSQKAVCSKV GNSEVIKVDV IGSDARVSAT GHLCATTGSI KLVATGVPDV
TYQWYKDNQL LNGQITDSLR TPDAGKYWAV LTYRTLGCKA RTDTAVLDRS APVLPSITSS
SGFNRICPNS SLPLVGSGGL LYRWQKDDTS ISNNESSQLV ASSPGTFVVT ATDIYGCEGT
SSPVTITSVT PVVVTLDSIP GVCGPNNPAY TLTGNPPGGD FAGAGIETDA FVPEQAGVGN
HTITYTVKPA PECAGTVATR IAVVAPIPTI QLADSLTTYR GNTFSLNPVY TGDPVQFQWT
SATYLDNPTA ANPTIADIAD DITYTVDATN STGCAVKDTI HITVFARAWV PDAFSPNGDG
QNDVLELPGI AAFPDAVFTL FNRWGEVVYS SGKGYTNPFD GTLNGTALPT GVYAYTLYTA
PEKPVTRGRI LLVR
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