Gene Slin_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1867 
Symbol 
ID8725604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2255905 
End bp2257458 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content53% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003386711 
Protein GI284036781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0109165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ATCTACTTGT GTTTTTGCTG GTTACCAGTT GGTGTGTGGT AACGTCTGCA 
TTCGCTCAAT CGAAAAAAAC AGCCACCGAC CCCGTAACCC GTTATGATGC CTATATCCAG
CAGGCGGTGC GCGATTGGAA GGTGCCCGGC TTGACAGTGA CGGTCGTTAA AGACGGCAAA
ATCCTTCTGA AGAAAGGCTA TGGCGTTCGG GTAATTGGCA AACCCGACCC CGTCGATTCT
CAAACGCTCT TCGCCATGGC ATCAACAACC AAAGCCATGA CGGCGGCCTG CCTGGGTATG
ATGGTCGATG AGGGCAAACT AAACTGGGAT GATCCGGTAG CCGACTACCT GCCCGATTTT
CAGCTTTACG ATCCTGCCGT AACGCGGGAA TTGCGGGTAC GGGATTTGCT GATCCATAAT
ACCGGCGTTG GGAATGCCGA TGTGTTCTGG GCAGCCATGA AAATTCCGAG CAACGAAATC
CTGCGCCGGA TGCGGTACGT GAAACCGTCC TACTCGCTGC GGGCGGGGTT CATTTACCAG
AATGTTATGT ATCTGGCAGC AGGTAAAGTG CTGGAAAAAG TAAGTGGTAT ACCCTGGGAT
AAATTTATTC GTACCCGTAT TTTCGAACCG CTCAACATGC GCCGGACAAA GGCGCTGTTT
GGTGAGGTAA CGGATGCTAA CCGCGCTAAA CCACACCTGG AGGTGAATGA CACCGTTCGG
TTGGTCGATA GCCCGTTGGA AGAGGGACTG GTCGATGCCG TTGGACCTGC GGGATCTGTC
TGGACGTGTC CTGATGATAT TACGGCCTGG ATGCAGTGTA TGCTCGACTC GGGGCGCTAT
CAGGGCAAAA CGCTCTTGAA ACCCGCCACC TGGGCCGAGT TGTTCAAGCC CCAGACCTTC
GTTACCGATG CCGAGTTCTA TCCAACCCAA CTGTTAACCA AACCCGTCTG GAAAACCTAC
GGCCTTGGGT GGTTTCAGCA GGATTACCGG GGGCATCGGA TTAATTTCCA CACCGGTAGC
CTGACGGGTA TGATTGCCAT TCACGGGCAA CTACCCGACC AGAAACTGGC CGTTTATGTG
CAGGGTAACC TCGATCATGC CGAACTGCGC CACGCACTGA TGTTCCGGGC TTTCGATGAG
TTTGCCCTGG GGCCGGATCA GGACTGGAGT GTCTCGTTTC AGAAATTGTA CGGGGGCTTC
AAACAGGGAG CCAAACTGGC CGAGCGTAAA GCCGACAGCA CACGCGTACT AAATACCAGC
CCATCGCTTC CGCTAACAGC TTATGTGGGT ACGTATAACA GCCCCGTTTA CGGCAAGGTT
GACGTGACCC TGCGGCAGGG CAAACTCTAT GTATCCATTA ATGACATAAT GACCGGCCGT
ATGGAACATT GGCATTTCGA CACCTTTCGG CTGGTTTATG ACCAATTCTG GAATGGCAAA
GACCTCGTCA GTTTTGTACT CGACACGCAG GGGAAAGCCA CAACCTTCAA AACGTTTGGC
CTTGAATTTG CCAGGGCGGC CGATACCGGG GGAAAAGGTG TTGCCGAACG GTAG
 
Protein sequence
MKNNLLVFLL VTSWCVVTSA FAQSKKTATD PVTRYDAYIQ QAVRDWKVPG LTVTVVKDGK 
ILLKKGYGVR VIGKPDPVDS QTLFAMASTT KAMTAACLGM MVDEGKLNWD DPVADYLPDF
QLYDPAVTRE LRVRDLLIHN TGVGNADVFW AAMKIPSNEI LRRMRYVKPS YSLRAGFIYQ
NVMYLAAGKV LEKVSGIPWD KFIRTRIFEP LNMRRTKALF GEVTDANRAK PHLEVNDTVR
LVDSPLEEGL VDAVGPAGSV WTCPDDITAW MQCMLDSGRY QGKTLLKPAT WAELFKPQTF
VTDAEFYPTQ LLTKPVWKTY GLGWFQQDYR GHRINFHTGS LTGMIAIHGQ LPDQKLAVYV
QGNLDHAELR HALMFRAFDE FALGPDQDWS VSFQKLYGGF KQGAKLAERK ADSTRVLNTS
PSLPLTAYVG TYNSPVYGKV DVTLRQGKLY VSINDIMTGR MEHWHFDTFR LVYDQFWNGK
DLVSFVLDTQ GKATTFKTFG LEFARAADTG GKGVAER