Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1867 |
Symbol | |
ID | 8725604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2255905 |
End bp | 2257458 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | beta-lactamase |
Protein accession | YP_003386711 |
Protein GI | 284036781 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0109165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA ATCTACTTGT GTTTTTGCTG GTTACCAGTT GGTGTGTGGT AACGTCTGCA TTCGCTCAAT CGAAAAAAAC AGCCACCGAC CCCGTAACCC GTTATGATGC CTATATCCAG CAGGCGGTGC GCGATTGGAA GGTGCCCGGC TTGACAGTGA CGGTCGTTAA AGACGGCAAA ATCCTTCTGA AGAAAGGCTA TGGCGTTCGG GTAATTGGCA AACCCGACCC CGTCGATTCT CAAACGCTCT TCGCCATGGC ATCAACAACC AAAGCCATGA CGGCGGCCTG CCTGGGTATG ATGGTCGATG AGGGCAAACT AAACTGGGAT GATCCGGTAG CCGACTACCT GCCCGATTTT CAGCTTTACG ATCCTGCCGT AACGCGGGAA TTGCGGGTAC GGGATTTGCT GATCCATAAT ACCGGCGTTG GGAATGCCGA TGTGTTCTGG GCAGCCATGA AAATTCCGAG CAACGAAATC CTGCGCCGGA TGCGGTACGT GAAACCGTCC TACTCGCTGC GGGCGGGGTT CATTTACCAG AATGTTATGT ATCTGGCAGC AGGTAAAGTG CTGGAAAAAG TAAGTGGTAT ACCCTGGGAT AAATTTATTC GTACCCGTAT TTTCGAACCG CTCAACATGC GCCGGACAAA GGCGCTGTTT GGTGAGGTAA CGGATGCTAA CCGCGCTAAA CCACACCTGG AGGTGAATGA CACCGTTCGG TTGGTCGATA GCCCGTTGGA AGAGGGACTG GTCGATGCCG TTGGACCTGC GGGATCTGTC TGGACGTGTC CTGATGATAT TACGGCCTGG ATGCAGTGTA TGCTCGACTC GGGGCGCTAT CAGGGCAAAA CGCTCTTGAA ACCCGCCACC TGGGCCGAGT TGTTCAAGCC CCAGACCTTC GTTACCGATG CCGAGTTCTA TCCAACCCAA CTGTTAACCA AACCCGTCTG GAAAACCTAC GGCCTTGGGT GGTTTCAGCA GGATTACCGG GGGCATCGGA TTAATTTCCA CACCGGTAGC CTGACGGGTA TGATTGCCAT TCACGGGCAA CTACCCGACC AGAAACTGGC CGTTTATGTG CAGGGTAACC TCGATCATGC CGAACTGCGC CACGCACTGA TGTTCCGGGC TTTCGATGAG TTTGCCCTGG GGCCGGATCA GGACTGGAGT GTCTCGTTTC AGAAATTGTA CGGGGGCTTC AAACAGGGAG CCAAACTGGC CGAGCGTAAA GCCGACAGCA CACGCGTACT AAATACCAGC CCATCGCTTC CGCTAACAGC TTATGTGGGT ACGTATAACA GCCCCGTTTA CGGCAAGGTT GACGTGACCC TGCGGCAGGG CAAACTCTAT GTATCCATTA ATGACATAAT GACCGGCCGT ATGGAACATT GGCATTTCGA CACCTTTCGG CTGGTTTATG ACCAATTCTG GAATGGCAAA GACCTCGTCA GTTTTGTACT CGACACGCAG GGGAAAGCCA CAACCTTCAA AACGTTTGGC CTTGAATTTG CCAGGGCGGC CGATACCGGG GGAAAAGGTG TTGCCGAACG GTAG
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Protein sequence | MKNNLLVFLL VTSWCVVTSA FAQSKKTATD PVTRYDAYIQ QAVRDWKVPG LTVTVVKDGK ILLKKGYGVR VIGKPDPVDS QTLFAMASTT KAMTAACLGM MVDEGKLNWD DPVADYLPDF QLYDPAVTRE LRVRDLLIHN TGVGNADVFW AAMKIPSNEI LRRMRYVKPS YSLRAGFIYQ NVMYLAAGKV LEKVSGIPWD KFIRTRIFEP LNMRRTKALF GEVTDANRAK PHLEVNDTVR LVDSPLEEGL VDAVGPAGSV WTCPDDITAW MQCMLDSGRY QGKTLLKPAT WAELFKPQTF VTDAEFYPTQ LLTKPVWKTY GLGWFQQDYR GHRINFHTGS LTGMIAIHGQ LPDQKLAVYV QGNLDHAELR HALMFRAFDE FALGPDQDWS VSFQKLYGGF KQGAKLAERK ADSTRVLNTS PSLPLTAYVG TYNSPVYGKV DVTLRQGKLY VSINDIMTGR MEHWHFDTFR LVYDQFWNGK DLVSFVLDTQ GKATTFKTFG LEFARAADTG GKGVAER
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