Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1863 |
Symbol | |
ID | 8725600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2248974 |
End bp | 2250203 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Redoxin domain protein |
Protein accession | YP_003386707 |
Protein GI | 284036777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.269933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTACT ACCGCTTCCT CATCCTGCTG CTGTTTCTGA GCATTAGCCG GAGTTTTGCC CAGTCAATTT ATCAAGGGCC TGACCCCGAA ACGCTTGCAA CGACGGAAGC AGAAAAAGCA TTTCTGACCG CATTTACAAC AACGTTCAAG ACCGATTTCG ACGTGTCCGG CCAGTATGCC AAACTAGCCG ATACCGGCCT GGACGCCTGG GAAATGCAAC TTTTCGACGC CCGTAAAGCC CAGTTAGCTT TTTACAAAGC CTATCCGCAG GAAAGTCAGT TTTCAGCACC TTTTAAACAG TACATCGACG CCTGTATCCG GTGGAATTAC TGGCATTTAT TGCTGGCTTA CCCCATTCTG CGCGGCAATG CCCAAACGAG CCAGCTTAAC GTACCGTCGC TGCCCGCCAT TATGGTCGAT GAACTGTCAG GTCTGAACAT GAATGATGAA GCGGCCCTCC CTGCTGAATC GTATCAACAT TTCCTGTACT TCTACATTAC CTACGTCAAC TCCAAAGCCC GCAATTTTGT AAAATACACG CAGGCCGATA TACACACTAG TTTAACCGAC AAAGCGGCTG TGGCGCGTAA TCAATTGACG GGGCGACCTT ATCAGTATGC ACTGGCGCGA CTGCTGGTCG AAAACTGCGA GAAGGTAACC CCCGCTTCCG TTCGAACTGT ATTCGACTTA TTGGGCAATA CACCCAATGC AAGCAGGTAT GTAACGATTG TAAAAGCCCG ATGCGGAGCG GTCATGGACA GGAAAGACGA ACCCGTTTCC GCCACCAAAA AGAAACCCTC CGACCCGAAT GCATTTTCCT TTACCAACCT GAGTGGCAAA GTCGTTACGC TGGAAGAGTT TGCCGGGAAA GTAATCTACC TGGATGTGTG GGCAAGTTGG TGTGGCCCCT GCCGGGCCGA ATTCCCGTTC TCCAAACAAC TCCAGGAACG CCTGACGAAA AAGCAGAAAG AACAGGTCGT CTTTTTGTAC CTCTCCATCG ACGACTCCGA AGAAGCCTGG AAAAAAGCAC TCAACACGCT GCAACTAACC GGCGAACAAG GCTTGTCGAA AGGGGGCTGG CATTCCCGAA CCGTTCAGTA TTTCGGCATC AGCAGCATCC CGCGTTATCT GCTGATCGAT AGAAAAGGCA AGGTTGCCGA CGAAAATGCC AAACGTCCGA GCCAGACCGA TGCCATCCTA CAGGATATTC TCAAGTTGAT ATCCGAGTAG
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Protein sequence | MIYYRFLILL LFLSISRSFA QSIYQGPDPE TLATTEAEKA FLTAFTTTFK TDFDVSGQYA KLADTGLDAW EMQLFDARKA QLAFYKAYPQ ESQFSAPFKQ YIDACIRWNY WHLLLAYPIL RGNAQTSQLN VPSLPAIMVD ELSGLNMNDE AALPAESYQH FLYFYITYVN SKARNFVKYT QADIHTSLTD KAAVARNQLT GRPYQYALAR LLVENCEKVT PASVRTVFDL LGNTPNASRY VTIVKARCGA VMDRKDEPVS ATKKKPSDPN AFSFTNLSGK VVTLEEFAGK VIYLDVWASW CGPCRAEFPF SKQLQERLTK KQKEQVVFLY LSIDDSEEAW KKALNTLQLT GEQGLSKGGW HSRTVQYFGI SSIPRYLLID RKGKVADENA KRPSQTDAIL QDILKLISE
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