Gene Slin_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1863 
Symbol 
ID8725600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2248974 
End bp2250203 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content51% 
IMG OID 
ProductRedoxin domain protein 
Protein accessionYP_003386707 
Protein GI284036777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.269933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACT ACCGCTTCCT CATCCTGCTG CTGTTTCTGA GCATTAGCCG GAGTTTTGCC 
CAGTCAATTT ATCAAGGGCC TGACCCCGAA ACGCTTGCAA CGACGGAAGC AGAAAAAGCA
TTTCTGACCG CATTTACAAC AACGTTCAAG ACCGATTTCG ACGTGTCCGG CCAGTATGCC
AAACTAGCCG ATACCGGCCT GGACGCCTGG GAAATGCAAC TTTTCGACGC CCGTAAAGCC
CAGTTAGCTT TTTACAAAGC CTATCCGCAG GAAAGTCAGT TTTCAGCACC TTTTAAACAG
TACATCGACG CCTGTATCCG GTGGAATTAC TGGCATTTAT TGCTGGCTTA CCCCATTCTG
CGCGGCAATG CCCAAACGAG CCAGCTTAAC GTACCGTCGC TGCCCGCCAT TATGGTCGAT
GAACTGTCAG GTCTGAACAT GAATGATGAA GCGGCCCTCC CTGCTGAATC GTATCAACAT
TTCCTGTACT TCTACATTAC CTACGTCAAC TCCAAAGCCC GCAATTTTGT AAAATACACG
CAGGCCGATA TACACACTAG TTTAACCGAC AAAGCGGCTG TGGCGCGTAA TCAATTGACG
GGGCGACCTT ATCAGTATGC ACTGGCGCGA CTGCTGGTCG AAAACTGCGA GAAGGTAACC
CCCGCTTCCG TTCGAACTGT ATTCGACTTA TTGGGCAATA CACCCAATGC AAGCAGGTAT
GTAACGATTG TAAAAGCCCG ATGCGGAGCG GTCATGGACA GGAAAGACGA ACCCGTTTCC
GCCACCAAAA AGAAACCCTC CGACCCGAAT GCATTTTCCT TTACCAACCT GAGTGGCAAA
GTCGTTACGC TGGAAGAGTT TGCCGGGAAA GTAATCTACC TGGATGTGTG GGCAAGTTGG
TGTGGCCCCT GCCGGGCCGA ATTCCCGTTC TCCAAACAAC TCCAGGAACG CCTGACGAAA
AAGCAGAAAG AACAGGTCGT CTTTTTGTAC CTCTCCATCG ACGACTCCGA AGAAGCCTGG
AAAAAAGCAC TCAACACGCT GCAACTAACC GGCGAACAAG GCTTGTCGAA AGGGGGCTGG
CATTCCCGAA CCGTTCAGTA TTTCGGCATC AGCAGCATCC CGCGTTATCT GCTGATCGAT
AGAAAAGGCA AGGTTGCCGA CGAAAATGCC AAACGTCCGA GCCAGACCGA TGCCATCCTA
CAGGATATTC TCAAGTTGAT ATCCGAGTAG
 
Protein sequence
MIYYRFLILL LFLSISRSFA QSIYQGPDPE TLATTEAEKA FLTAFTTTFK TDFDVSGQYA 
KLADTGLDAW EMQLFDARKA QLAFYKAYPQ ESQFSAPFKQ YIDACIRWNY WHLLLAYPIL
RGNAQTSQLN VPSLPAIMVD ELSGLNMNDE AALPAESYQH FLYFYITYVN SKARNFVKYT
QADIHTSLTD KAAVARNQLT GRPYQYALAR LLVENCEKVT PASVRTVFDL LGNTPNASRY
VTIVKARCGA VMDRKDEPVS ATKKKPSDPN AFSFTNLSGK VVTLEEFAGK VIYLDVWASW
CGPCRAEFPF SKQLQERLTK KQKEQVVFLY LSIDDSEEAW KKALNTLQLT GEQGLSKGGW
HSRTVQYFGI SSIPRYLLID RKGKVADENA KRPSQTDAIL QDILKLISE