Gene Slin_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1860 
Symbol 
ID8725597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2244424 
End bp2245440 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content53% 
IMG OID 
Productaldo/keto reductase 
Protein accessionYP_003386704 
Protein GI284036774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.599659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGGA TTCAAACCGT TAATTTAGGA AGTCAGGGCC TTGTGGTGCC CAACATAGGT 
CTGGGCTGCA TGGGCATGAC CCAGATTGCA GGAGCCGATA TTTACGGAAA AGCGAACGAG
TCGGAAGCTA TTGCCACCAT TCATCGGTCG CTGGAGCTAG GCGGCAACTT CCTCGACACC
GCCGATCTGT ACGGCCCGCT GGCCAACGAA CGGCTAATCG CTAAAGCCAT CCGGGGCAAC
CGGAACAGCT ACATCATTGC GACCAAATTC GGCTTTGAAA TTGACGACAA TGAACAACTT
ACCTGGCAGT TCAACGGGCA GCCCGCCTAT GTCAGAAAAG CCGTTGAACG TTCCCTGAAA
AATCTGGGCA CCGATTTCAT CGATCTGTAT TATTTACACC GCCTGGACCC CAATACGCCC
ATTGACGAAA CGGTAGGCGC TATGGCCGAT CTGGTGAAAG AAGGGAAAGT CGGGTATATT
GGTTTGTCGG AAGTGTCGTC GGCAACCATT CGAAAAGCCC ATCAGGTTCA CCCGCTAACC
GCCGTACAGA CGGAGTACTC TCTGTTTGAG CGAACAGCAG AGGAAGCGGG CATTACCGAT
ACATTACATG AGCTTGGTAT AGGCTTCATC GCGTATTCGC CCCTGGGGCG CGGATTTTTG
TCGGGAGATA CGACCTTTAA AAGCCCGGAC GACTTTCCGG CCGATGACTT CCGGCGAAGC
ATTCCCCGGT TTCAGGGCGA TAACTTTTAC CGGAACCTCG AACTGGTAAA AACAATCAAA
CAGCTGGCCG ACGAAAAAGC TGTGACGCCT TCCCAACTGG CGCTCGCGTG GGTGATAGCC
AAAGGGTTTG TTCCCATTCC CGGCACCAAG CGGGTTTCGT ACCTGGAGCA GAATATGGCA
GCGGCCAGCG TTTCGTTAAC AGCCAATGAG TTGGAACGTC TGGAGTCTAT TGTTCCGTTA
GGTATATCGA CGGGCGACCG ATATGATGCG GCAGGTATGC AGTGGATCGA TCAATAG
 
Protein sequence
MERIQTVNLG SQGLVVPNIG LGCMGMTQIA GADIYGKANE SEAIATIHRS LELGGNFLDT 
ADLYGPLANE RLIAKAIRGN RNSYIIATKF GFEIDDNEQL TWQFNGQPAY VRKAVERSLK
NLGTDFIDLY YLHRLDPNTP IDETVGAMAD LVKEGKVGYI GLSEVSSATI RKAHQVHPLT
AVQTEYSLFE RTAEEAGITD TLHELGIGFI AYSPLGRGFL SGDTTFKSPD DFPADDFRRS
IPRFQGDNFY RNLELVKTIK QLADEKAVTP SQLALAWVIA KGFVPIPGTK RVSYLEQNMA
AASVSLTANE LERLESIVPL GISTGDRYDA AGMQWIDQ