| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1856 |
|---|
| Symbol | |
|---|
| ID | 8725593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2239380 |
|---|
| End bp | 2240306 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function UPF0187 |
|---|
| Protein accession | YP_003386700 |
|---|
| Protein GI | 284036770 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTATTT ACAACGCTAA AGACTGGCTT GGTGCGCTTC GACATTTTCA TACCAGCTAT
GTTATCCGGA TCCTTCTGCG CCGGGTTCTT CTGGTAGGCG CTTACGGAGC ACTCGTTACT
TTTATTGACC AGCACCGGGT CAACATCGAT TTACCAATCG ACGGCACCTT CTTCTCACTG
CTGGGTATTC TACTAAGTTT ACTACTGGTA TTTAGAACCA ACACGGCGTA TGACCGATTC
TGGGAGGGTC GTCGGCAATG GGGCATGTTG GTTAATTACA GTCGTAATTT TGCCGTGATG
ATGGATGCAA TTTTGCTAGA TTCGGATCGA GAGAACCGCC AGTTCTTCGC CCGGGCGTTA
TCTAACTTCG CGGTGGCGCT CAAGGGCCAT CTGCGAACCG GCGTAAATAT AACGGAACTG
GAAGAGACCG GCGGAAACGA TCGTAAAGCA CTGGCCCAGT CTAAACACGT TCCGAGTCGC
ATTGCCGCCC TGTTGATGCG CCGTTTGCAG AAACTGAAAC AACAGCGCGT TCTGACCGAC
GGCGACTTGA TTACCATCCG CACTTACCAC CAGGCTTTTC TGGATATCAC CGGCTCCTGC
GAACGAATAA AAAACACACC CATCCCCTTC TCCTACAGTT TTTTCATCAA GCTGTTTATT
ACCTTATATC TGCTGCTAAT GCCCCTCGTG CTGGTCGAAA CGTATGCTTA TTTCACGGTT
CTGGCAACTA TACTTGCCGC CTATGCCCTG CTCGGTGTGG AAATGATCGG CGATGAAATA
GAAGAACCCT TCGGGCTTGA CTGCAATGAT TTACCTCTCA ATCAAATTTC TCAGACAATC
CGCCGGAATA TGCACGAAAT ACTAATGAGC GAACTCCCGG TGGCGCAACA AACCCAGCTG
GAAGGGGAGT ATCAGAAGGT TAATTAG
|
|---|
| Protein sequence | MIIYNAKDWL GALRHFHTSY VIRILLRRVL LVGAYGALVT FIDQHRVNID LPIDGTFFSL
LGILLSLLLV FRTNTAYDRF WEGRRQWGML VNYSRNFAVM MDAILLDSDR ENRQFFARAL
SNFAVALKGH LRTGVNITEL EETGGNDRKA LAQSKHVPSR IAALLMRRLQ KLKQQRVLTD
GDLITIRTYH QAFLDITGSC ERIKNTPIPF SYSFFIKLFI TLYLLLMPLV LVETYAYFTV
LATILAAYAL LGVEMIGDEI EEPFGLDCND LPLNQISQTI RRNMHEILMS ELPVAQQTQL
EGEYQKVN
|
|---|
| |