| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1850 |
|---|
| Symbol | |
|---|
| ID | 8725587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2233508 |
|---|
| End bp | 2234884 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003386694 |
|---|
| Protein GI | 284036764 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.456311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC GAAACCGTAT ATCGCTCCAA TTTTCATTTA TTGTAGCCTC CATTCTGCTT
TTGTTTTCGG TGGTCGTTTA CGCTACGTCG GCGCATTACC GGAAAGAGGA ATTTTATGAA
CGGCTAAAAC GAAAAGCCCG GACAACGATG CGGTTTTTAG TGGAAGTGAA AGAAATTGAT
CACAATCTGC TCAAAATCAT CGACCGCAAT TCGCTGTCTG CCCTTATAGA TGAAAAAATA
TTAATATTTA ATGCGCAGGA CAAACTAATT TATGCCAGTA TCGACGATAA AATTATTCAT
TACCGCCAGG GCTTGCTTAA CCGGGTGCGT GAGGAGCGAC AACTTGAACT AACCGACGGG
GAGAACGAAG TCGTTGGCCT GCTGTATCAG CAGAACGGGC AGTCGCTGGT AGTGCTGGCA
TCGGCGTACG ACCAGTTTGG GAAAGCCAAA CTCAGTAATC TGCGGCACAC ACTCATCTGG
AGTTTATTGG GTGGTATCGG GCTAACGCTG GCGCTCGGCT TCTTTTTTGC CGGTCAGTCG
CTGCAACCCA TATCCCGGAT CAATCAACAG GTACAAACTA TTACCGCCAA TAACCTGCAG
CAGCGATTGA ATGAAGGGAA ACGACAGGAC GAGATCGACC AGTTAGCGGT TAACTTCAAC
CACGTGCTGG CTCGCCTGGA ACAGGCCTTT GACCAGCAGC GCAGCTTTGT TTCTCATGCT
TCCCATGAAT TGAGAACGCC TTTAACGGCC TTGAAATCTG AAATCCAGCT TGGACTTCTC
CAACGCCTTA GCCCGGAAGA GTACGAAGCC ATTCTGCAAA ATCTGCTGAC TGATACCGAT
CAACTCATTG CCTTATCCAA CAGTCTGCTG TCACTGGCCC GAACGCTGGA GAACCTGCCT
CGCGTACAGC TAACGACTGT CCGGCTCGAC GAGATAATCT TTTCGGCTCA GGACGAGCTA
CTCTCAACTA AGCCCACATT TCGGATTCTG GTTGATTATG ACACAATGAC TGATACGGAG
CTGCTTGTTC GGGGAAACGA AGATTTGCTT CGGCGTGTCG TGCTGAATCT ATTGGACAAT
GCCTGTAAGT ATTCGGCAAA TCACGAAGCT CTGGTTTACA TCGGGGCCGA TACGGCTACT
TGCTGGTTTA CGGTGCAGGA TGCAGGTATC GGGATAACTG GAGCGGACGT ATCCCGGGTC
TTCGAGCCAT TTTTTCGCGC CAGTAATGCT CTGAATTACG ACGGTTTTGG CGTCGGGCTT
TCGATTTGCC AACGCATTGT CGCGCTTCAT CAGGGAAGCA TAACGGTTGT TAGTGAACCA
GGGCACGGTA GTACGTTTAC CGTGAACTTT CCCCTGGTAA ATGGTCAGGC TGCCTGA
|
|---|
| Protein sequence | MTIRNRISLQ FSFIVASILL LFSVVVYATS AHYRKEEFYE RLKRKARTTM RFLVEVKEID
HNLLKIIDRN SLSALIDEKI LIFNAQDKLI YASIDDKIIH YRQGLLNRVR EERQLELTDG
ENEVVGLLYQ QNGQSLVVLA SAYDQFGKAK LSNLRHTLIW SLLGGIGLTL ALGFFFAGQS
LQPISRINQQ VQTITANNLQ QRLNEGKRQD EIDQLAVNFN HVLARLEQAF DQQRSFVSHA
SHELRTPLTA LKSEIQLGLL QRLSPEEYEA ILQNLLTDTD QLIALSNSLL SLARTLENLP
RVQLTTVRLD EIIFSAQDEL LSTKPTFRIL VDYDTMTDTE LLVRGNEDLL RRVVLNLLDN
ACKYSANHEA LVYIGADTAT CWFTVQDAGI GITGADVSRV FEPFFRASNA LNYDGFGVGL
SICQRIVALH QGSITVVSEP GHGSTFTVNF PLVNGQAA
|
|---|
| |