Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1840 |
Symbol | |
ID | 8725577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2222931 |
End bp | 2224028 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003386684 |
Protein GI | 284036754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.772932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA ACCTCTCCAT ACTTCTTCTC ATTACCCTCT TGAGCGCAGC CTGCAAGCGC GACCCTCAGG GCACAACGCC CACCTATCAG GAATTGACCG AAGCCGTCTA TGCCTCAGGC AATGTGTACC CACGCAATGA GTACACCGTT ACGGCCGATG CTGCCGGTAT GCTGCAGCAA CGGCTCATCA GCGAAGGGGA CTCCATCCGC CAGAATCAGC TGCTGTTCGT GCTGGAAAGT GCTTCGGAAG ATGCCCGCCA GCAGGCCGCA GCCAACGCCT ACCGACAGGC GCGGGCTAAC TTAAGCGCCA ACTCCCCCGT TCTGGCCGAA CTGGAAGCGC AGGTTCGTAA TGCCCGAACC CGTGTGGCCA ACGACTCCAT CAATTACAAC CGATTCAAGG AGTTGTACGG TCAAAACGCC ACGTCAAGGG CCGAACTGGA GCGGGCCGAA CTGAACTACA CCATCTCCCG CAATAACCTC CGCGCCCAGC TCAACACCTT TCAACGAAGC CGCGACCAGA TCCGGCTGGA CGTTGAAAAC AATCGCAGTC AGTTCGTTAC GAGCGAAGTA GCGGGTCGAA ACACGCGCAT CCGAAGTTTT GTAAACGGCA AAGTCTACGA AGTTTATAAA GACCCCGGTG AAGTTGTCCG CGTTGGGGAT CAGCTGGCAC TAGTGGGTAG CGGCAATCAA CTGTTTGCCC AGCTGGCCGT CGATGAAAGC GACTTTGGGC GGATTCGAAC AGGACAGGAG GTTATTTTAA AAGCGGATGT TTATCCGGAT AAGGTTTTCA AAGCCCGTGT TGAAAAGATA TATCCGAAGC TCAACCGCAC CGATCAATCG TTTCGGGTAG ATGCCGAGTT CATTGGCGAA CGGCCTGCCT CGTATTACGG CCTGACGGTC GAAGCCAACA TCATTATCAG CCAGAACAAG CATGTGCTCA CCATTCCCAA AACGTATGTT ATCGGTACGG ATAGTGTCTG GGTGGAACAG GATGGCAAGA AGCAAAAAGT GAAGTTTCAG AAAGGTGCCG AAAACTTCGA CCGGGTTCAG GTAAAAGGCG GCTTGACGGA GACATCAAAA TTAATTTTGA TTGAGTGA
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Protein sequence | MKTNLSILLL ITLLSAACKR DPQGTTPTYQ ELTEAVYASG NVYPRNEYTV TADAAGMLQQ RLISEGDSIR QNQLLFVLES ASEDARQQAA ANAYRQARAN LSANSPVLAE LEAQVRNART RVANDSINYN RFKELYGQNA TSRAELERAE LNYTISRNNL RAQLNTFQRS RDQIRLDVEN NRSQFVTSEV AGRNTRIRSF VNGKVYEVYK DPGEVVRVGD QLALVGSGNQ LFAQLAVDES DFGRIRTGQE VILKADVYPD KVFKARVEKI YPKLNRTDQS FRVDAEFIGE RPASYYGLTV EANIIISQNK HVLTIPKTYV IGTDSVWVEQ DGKKQKVKFQ KGAENFDRVQ VKGGLTETSK LILIE
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