Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1830 |
Symbol | |
ID | 8725567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2208076 |
End bp | 2209404 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | glucose/sorbosone dehydrogenase-like protein |
Protein accession | YP_003386674 |
Protein GI | 284036744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.922433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.747295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGCT ATTTTTCCCT CCTTCTGGTT AGCTGTTCGA CATTACTGGC GCAGACACCC AATCTTACAT TAGAGTTGAT CACATCTGGT TTCTATCGAC CCTGTGATGT GGCTGTAGTA AGTGATACTA AATTTCTCGT TGCGCAGACA GATGGCAAGA TCAAACTGGT AAAAAATGGA CAACTGACAA CCTTTCTGGA TATTGGCAGC AAGATCGCCG ATCCCGACTG GGGAGGTATT TTCGGGTTTA CCCTGCATCC TCAATACGAA ACAAATGGGT ATATCTACGT TCACTATTCC CGGAAAGGCG ATATGGCTTC ATTGATCGCC CGCTTTACGA GGAACAGCGC GAATCCGGAT GTGGCCGATT TGAGCTCAGA AGTTAGTATT CTTACAATTC CTTACCCAAA TGGAGGTCAC CGGTCAGGCC GGGTTGGATT CGGGCCGGAT GGCTATCTTT ATATCACAAC GGGCGATTCA TCGCCGGGTG CCCGTAACTC AATTGGGGAC CCGGCTAAAC TGGCGCAAAA TCTCACCGAC CTACACGGTA AATTGCTCAG GATTGATGTA AACGGTGGCT TCCCGTATGC TATACCCCCC ACCAATCCAT TTGCCAGTCC GGCGGATGGT GTGCCCGACG AATTGTATGC ACTGGGTCTT CGTAATCCCT GGCGCTGGAG TTTTGACCGG CAAACGGGCG ATTTCTGGCT GGGTGATGTC GGTCAGGACG ACTGGGAGGA ATTAAATTTC ACCAGTGCCA ATGCACCCGC CCCGCAGAAC TACGGCTGGC CCTGCTATGA AGGGAGCCAT ACCTATAATA CAACCTGCCC ACCGGGCAGC ACGTACCATA TGCCTTTGCT GGACTATGCC GGGTATAGCT CGGGTAAAGA TGCCAGCATA ACGGGAGGCT TCGTTTACCG GGGAAGTAAA TATCCTGCTT TAAGGGGCTG GTACGTCTAT GCCGATTATG CACGAGGCAC TTACTGGACC CTAAAGCGGG AAACGAACGG CACGTTTCAA AACACGCAAC AGTCGATTTC CATCTCATCG AGTCCTGTTT CGTTTGGCGA GGGGCCGGAT GGCGAACTGT ATGTCGTTTC GCTGCTGGAT GGCAAACTCT ACAGAATCAA TGTATATACC ATTCAGAGTG TACGAAACGG CAATTGGAAC AGCCCATCAA CCTGGAATTG CAACTGTGTT CCTACGTCGG CAGACGTAGT GACGGTCTCA ACCGGCCATA CGGTTACGGT TAATCAGGCT TCATCGGCTA ATCTGCTGAT ATTGACGGGT AAAATCCAGA TTTCTGCCGA CGGCAAGTTA ACTTTTTGA
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Protein sequence | MIRYFSLLLV SCSTLLAQTP NLTLELITSG FYRPCDVAVV SDTKFLVAQT DGKIKLVKNG QLTTFLDIGS KIADPDWGGI FGFTLHPQYE TNGYIYVHYS RKGDMASLIA RFTRNSANPD VADLSSEVSI LTIPYPNGGH RSGRVGFGPD GYLYITTGDS SPGARNSIGD PAKLAQNLTD LHGKLLRIDV NGGFPYAIPP TNPFASPADG VPDELYALGL RNPWRWSFDR QTGDFWLGDV GQDDWEELNF TSANAPAPQN YGWPCYEGSH TYNTTCPPGS TYHMPLLDYA GYSSGKDASI TGGFVYRGSK YPALRGWYVY ADYARGTYWT LKRETNGTFQ NTQQSISISS SPVSFGEGPD GELYVVSLLD GKLYRINVYT IQSVRNGNWN SPSTWNCNCV PTSADVVTVS TGHTVTVNQA SSANLLILTG KIQISADGKL TF
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