Gene Slin_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1830 
Symbol 
ID8725567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2208076 
End bp2209404 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content50% 
IMG OID 
Productglucose/sorbosone dehydrogenase-like protein 
Protein accessionYP_003386674 
Protein GI284036744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.922433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.747295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCT ATTTTTCCCT CCTTCTGGTT AGCTGTTCGA CATTACTGGC GCAGACACCC 
AATCTTACAT TAGAGTTGAT CACATCTGGT TTCTATCGAC CCTGTGATGT GGCTGTAGTA
AGTGATACTA AATTTCTCGT TGCGCAGACA GATGGCAAGA TCAAACTGGT AAAAAATGGA
CAACTGACAA CCTTTCTGGA TATTGGCAGC AAGATCGCCG ATCCCGACTG GGGAGGTATT
TTCGGGTTTA CCCTGCATCC TCAATACGAA ACAAATGGGT ATATCTACGT TCACTATTCC
CGGAAAGGCG ATATGGCTTC ATTGATCGCC CGCTTTACGA GGAACAGCGC GAATCCGGAT
GTGGCCGATT TGAGCTCAGA AGTTAGTATT CTTACAATTC CTTACCCAAA TGGAGGTCAC
CGGTCAGGCC GGGTTGGATT CGGGCCGGAT GGCTATCTTT ATATCACAAC GGGCGATTCA
TCGCCGGGTG CCCGTAACTC AATTGGGGAC CCGGCTAAAC TGGCGCAAAA TCTCACCGAC
CTACACGGTA AATTGCTCAG GATTGATGTA AACGGTGGCT TCCCGTATGC TATACCCCCC
ACCAATCCAT TTGCCAGTCC GGCGGATGGT GTGCCCGACG AATTGTATGC ACTGGGTCTT
CGTAATCCCT GGCGCTGGAG TTTTGACCGG CAAACGGGCG ATTTCTGGCT GGGTGATGTC
GGTCAGGACG ACTGGGAGGA ATTAAATTTC ACCAGTGCCA ATGCACCCGC CCCGCAGAAC
TACGGCTGGC CCTGCTATGA AGGGAGCCAT ACCTATAATA CAACCTGCCC ACCGGGCAGC
ACGTACCATA TGCCTTTGCT GGACTATGCC GGGTATAGCT CGGGTAAAGA TGCCAGCATA
ACGGGAGGCT TCGTTTACCG GGGAAGTAAA TATCCTGCTT TAAGGGGCTG GTACGTCTAT
GCCGATTATG CACGAGGCAC TTACTGGACC CTAAAGCGGG AAACGAACGG CACGTTTCAA
AACACGCAAC AGTCGATTTC CATCTCATCG AGTCCTGTTT CGTTTGGCGA GGGGCCGGAT
GGCGAACTGT ATGTCGTTTC GCTGCTGGAT GGCAAACTCT ACAGAATCAA TGTATATACC
ATTCAGAGTG TACGAAACGG CAATTGGAAC AGCCCATCAA CCTGGAATTG CAACTGTGTT
CCTACGTCGG CAGACGTAGT GACGGTCTCA ACCGGCCATA CGGTTACGGT TAATCAGGCT
TCATCGGCTA ATCTGCTGAT ATTGACGGGT AAAATCCAGA TTTCTGCCGA CGGCAAGTTA
ACTTTTTGA
 
Protein sequence
MIRYFSLLLV SCSTLLAQTP NLTLELITSG FYRPCDVAVV SDTKFLVAQT DGKIKLVKNG 
QLTTFLDIGS KIADPDWGGI FGFTLHPQYE TNGYIYVHYS RKGDMASLIA RFTRNSANPD
VADLSSEVSI LTIPYPNGGH RSGRVGFGPD GYLYITTGDS SPGARNSIGD PAKLAQNLTD
LHGKLLRIDV NGGFPYAIPP TNPFASPADG VPDELYALGL RNPWRWSFDR QTGDFWLGDV
GQDDWEELNF TSANAPAPQN YGWPCYEGSH TYNTTCPPGS TYHMPLLDYA GYSSGKDASI
TGGFVYRGSK YPALRGWYVY ADYARGTYWT LKRETNGTFQ NTQQSISISS SPVSFGEGPD
GELYVVSLLD GKLYRINVYT IQSVRNGNWN SPSTWNCNCV PTSADVVTVS TGHTVTVNQA
SSANLLILTG KIQISADGKL TF