Gene Slin_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1826 
Symbol 
ID8725563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2203442 
End bp2203903 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003386670 
Protein GI284036740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.450055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTA AAACGAGTGG CTATGCAATC CGGGGACTGG CTTATCTAGC CCTGAAAAGT 
ACCGCCGTAA ACAAAATTGG TGTTCATGAA CTGGCGGCTG AACTGAACGT GCCTCAACCC
TTCCTGGGCA AAATCATGCA GGGGCTTGTC CGGCGGGACA TCATCAGTTC CACCAAAGGG
CCGAATGGGG GGTTTTTCAC GAACGAACGA ACCCTCACAA CGCCCATCAT CGACGTGGTG
GACGCTATTG ATGGCCTGGG TATGTTTCGC CGGTGCTTTC TGGGTCTGCC CGAATGCAAC
AGTGAGAAGC CCTGCCCACT GCATCAACAC GTTATTGGGT TTCGGGATTC CCTCCAGCAC
TCGCTCGAAA CGCTGACAGT ACACGATATG GTACGGGACA TAGAAGGGGG CTTATCGGTG
TTGAAACGAT TAGCTGTTCT ATCCTCCACG GAGCATCCAT GA
 
Protein sequence
MISKTSGYAI RGLAYLALKS TAVNKIGVHE LAAELNVPQP FLGKIMQGLV RRDIISSTKG 
PNGGFFTNER TLTTPIIDVV DAIDGLGMFR RCFLGLPECN SEKPCPLHQH VIGFRDSLQH
SLETLTVHDM VRDIEGGLSV LKRLAVLSST EHP