| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1811 |
|---|
| Symbol | |
|---|
| ID | 8725548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2186971 |
|---|
| End bp | 2187726 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003386655 |
|---|
| Protein GI | 284036725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.52551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAT CTACTGAATC AGTCATTTCA ATTAAAGGGC TCCGAAAGTC CTTCGGTGAT
CTGCACGTCC TGCGGGGAGT CGATCTGGAA GTAAACCGGG GCGAAAACGT AGCCGTACTC
GGCCGGTCCG GCACGGGTAA GTCAGTGTTG ATCAAGCTGA TGGTTGGCCT GCTCAAACCA
GATGCCGGCA GTATCCTTGT TCTTGGGCAG GATGTTCAAA CATTACAGGG AAAGGAACTG
GACTTATTTC GGCAAAAAGT GGGCTTCTCG TTTCAGAGCA GCGCCCTGTA TGACAGCATG
AGTATCCGCG AAAATCTTGA GTTTCCGCTG GTGCGGAACG TCCGGAACCT GAGCCGCGGA
GAGATTGACA AAGCGGTTGA AGAAGCCCTC GACGATGTGG GCCTGTCGCA AACCATCAAC
CAGATGCCAT CAGAGCTATC AGGTGGGCAG CGCAAGCGGA TCGGCATTGC CCGAACGTTG
ATCCTGAAGC CCGATATCAT GCTCTACGAC GAGCCAACGG CTGGTTTGGA CCCGATTACG
AGTATTGAAA TCAATAACCT CATCAACGAA GTTCGGGAGC GGTTTGGGGC TACATCCATC
ATCATTACCC ACGACCTGAC CTGCGCCAAA ACTACCGGCG ACCGGGTAGC TATGCTGCTC
GACGGAAAGT TTGAGCGGGT GGGTCCATTT GACGAGGTCT TTGCCGACCC GGATGAGCGG
ATACAGCAGT TTTACAATTA CAAGTTTGTG AATTAA
|
|---|
| Protein sequence | MTSSTESVIS IKGLRKSFGD LHVLRGVDLE VNRGENVAVL GRSGTGKSVL IKLMVGLLKP
DAGSILVLGQ DVQTLQGKEL DLFRQKVGFS FQSSALYDSM SIRENLEFPL VRNVRNLSRG
EIDKAVEEAL DDVGLSQTIN QMPSELSGGQ RKRIGIARTL ILKPDIMLYD EPTAGLDPIT
SIEINNLINE VRERFGATSI IITHDLTCAK TTGDRVAMLL DGKFERVGPF DEVFADPDER
IQQFYNYKFV N
|
|---|
| |