Gene Slin_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1809 
Symbol 
ID8725546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2185013 
End bp2185732 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386653 
Protein GI284036723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.641346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAA CATCCAGCCA ACTGCTCAAT CTCATCTTAA TCGCTTTAGT ATTTAGCCTG 
ACCAGCTGTT CATTAATCCG CGAGGATGTC GGCCCGTATC AGAGCGATAC GCAAACGTAT
GCCTTTACCG GGTTTGACCG GGTCGATATG GGAAGTGCTT TCAATATCAC CGTACAGCAG
GGGAACGCCT TTGCGGTCAT GGTCGAAGGC GACCGGCGCA ATCTGAATGA CCTGGATGTG
TATACGCGTA ATGGTACGCT GTATGCCCGG TACCGGATCT CCCGTCGGCG GGAGTACCAG
ACTTCATTTA CGATCACCAT GCCAACGCTG CGGGGTGTTG ATTTTTCGGG TGCCAGCCGC
TCGACGGTTA GTGGTTTTTC CAATCTGGAA AATCTCGACA TCACCTTATC GGGTGCTTCC
GAAAGTCAGG TTTCGGTTCC GGCCAGTCGG CTGAATCTTG TTATGTCCGG TGCTTCTGTC
TTGCATTTAA CCGGCCGGGG AACTTCCCTC ACAAGCGATC TGTCGGGTGC ATCATTAGTA
CAGGCTTTTG GCTACCCGGT AGAACATGCA GACGTGGAGG TTTCAGGGGC CAGTAAAGCC
AACATCAATG TGGGCACCTC ACTGGTTGTT AAGGCGAGTG GTGCCAGTAC CGTACGTTAC
CGGGGTTCAC CTGCGGTGCG GCAACAACTG AGTGGTGCCA GTTCTGTGCA GAAAGAATAA
 
Protein sequence
MKPTSSQLLN LILIALVFSL TSCSLIREDV GPYQSDTQTY AFTGFDRVDM GSAFNITVQQ 
GNAFAVMVEG DRRNLNDLDV YTRNGTLYAR YRISRRREYQ TSFTITMPTL RGVDFSGASR
STVSGFSNLE NLDITLSGAS ESQVSVPASR LNLVMSGASV LHLTGRGTSL TSDLSGASLV
QAFGYPVEHA DVEVSGASKA NINVGTSLVV KASGASTVRY RGSPAVRQQL SGASSVQKE