Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1809 |
Symbol | |
ID | 8725546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2185013 |
End bp | 2185732 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386653 |
Protein GI | 284036723 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.641346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAA CATCCAGCCA ACTGCTCAAT CTCATCTTAA TCGCTTTAGT ATTTAGCCTG ACCAGCTGTT CATTAATCCG CGAGGATGTC GGCCCGTATC AGAGCGATAC GCAAACGTAT GCCTTTACCG GGTTTGACCG GGTCGATATG GGAAGTGCTT TCAATATCAC CGTACAGCAG GGGAACGCCT TTGCGGTCAT GGTCGAAGGC GACCGGCGCA ATCTGAATGA CCTGGATGTG TATACGCGTA ATGGTACGCT GTATGCCCGG TACCGGATCT CCCGTCGGCG GGAGTACCAG ACTTCATTTA CGATCACCAT GCCAACGCTG CGGGGTGTTG ATTTTTCGGG TGCCAGCCGC TCGACGGTTA GTGGTTTTTC CAATCTGGAA AATCTCGACA TCACCTTATC GGGTGCTTCC GAAAGTCAGG TTTCGGTTCC GGCCAGTCGG CTGAATCTTG TTATGTCCGG TGCTTCTGTC TTGCATTTAA CCGGCCGGGG AACTTCCCTC ACAAGCGATC TGTCGGGTGC ATCATTAGTA CAGGCTTTTG GCTACCCGGT AGAACATGCA GACGTGGAGG TTTCAGGGGC CAGTAAAGCC AACATCAATG TGGGCACCTC ACTGGTTGTT AAGGCGAGTG GTGCCAGTAC CGTACGTTAC CGGGGTTCAC CTGCGGTGCG GCAACAACTG AGTGGTGCCA GTTCTGTGCA GAAAGAATAA
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Protein sequence | MKPTSSQLLN LILIALVFSL TSCSLIREDV GPYQSDTQTY AFTGFDRVDM GSAFNITVQQ GNAFAVMVEG DRRNLNDLDV YTRNGTLYAR YRISRRREYQ TSFTITMPTL RGVDFSGASR STVSGFSNLE NLDITLSGAS ESQVSVPASR LNLVMSGASV LHLTGRGTSL TSDLSGASLV QAFGYPVEHA DVEVSGASKA NINVGTSLVV KASGASTVRY RGSPAVRQQL SGASSVQKE
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