Gene Slin_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1803 
Symbol 
ID8725540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2178720 
End bp2179163 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386647 
Protein GI284036717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.825711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.812392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATT CGAAATGCAA AATCTGGGTT CATGCTGTTT TCGCTACAAA AGACCGAAAA 
CCGCTCATTA ACGCCCAAAT CATCGCAACC GTGCATGACA CCCTACGCAA ACAACTCATC
AACACGGGAT GCTTTGTGGA TTGTATTGGT GGCGTATTAG ATCACGTCCA CTTGTTGTTT
TTGCTTAACC CCGGCAAATC TATCGCCGAT GTGATGAAAC AAATTAAGGG CGGCAGTTCA
CATGCGTTTA ATCAGGTGAA GCTGACGAGT GTTCCTTTTG CCTGGCAAAC GGGTTATGGT
GCTTTTTCGG TTAGCGAGTC ACACGTGCCA CGGGTACGGG CGTACATCCT GAATCAGAAC
GAACACCATC GTACCGTTAC GTTCATGGAT GAATTTAACC GGTTTATGGC CCATTATGGA
TTACCAGCCG ATGAAAACGG GTAA
 
Protein sequence
MSHSKCKIWV HAVFATKDRK PLINAQIIAT VHDTLRKQLI NTGCFVDCIG GVLDHVHLLF 
LLNPGKSIAD VMKQIKGGSS HAFNQVKLTS VPFAWQTGYG AFSVSESHVP RVRAYILNQN
EHHRTVTFMD EFNRFMAHYG LPADENG