Gene Slin_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1795 
Symbol 
ID8725532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2167712 
End bp2168836 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content54% 
IMG OID 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_003386639 
Protein GI284036709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGTC TCAACAACCT CCTCCGCCCG CATATTCTTA CCCTGATGCC TTACTCATCC 
GCGCGCGATG AGTATACCGG TAAAGAGGGG GTATTTCTTG ATGCCAATGA AAATCCGCTG
GGTTCCACCA CCAGCGGAAA CTATAACCGC TACCCCGACC CGCATCAGTG GGCCATCAAA
CAACGGCTGG CTCCCATCAA GGGCGTTCGG CCGGAGCATA TTTTCCTGGG GAATGGCTCC
GATGAGCCCA TCGACCTCCT CGTTCGGGCT ACCTGTACGC CGGGTACGGA TTCCATTTTG
ATTATGCCGC CAACCTACGG CATGTACGAA GTATCGGCGT CGATTAACGA CGTTAAGGTT
ACGAAAGTCC CCCTGACAGC CGACTTTCTG GTGGATACCG ATGCCGTACT GGCCGCCATT
ACCGATACTA CGAAACTGAT CTGGTTATGC TCGCCCAACA ACCCGTCGGG TAATCTGCTT
CAGCCCGAGG CCATCCGGAC AATCCTCAAT GCCGCTCAAC AATCGCTGGT GATTGTTGAC
GAAGCCTATA TCGACTTTGC CGATGTGCCG TCCTGGACCA GTGAGCTGGA TAACTACCCG
AATCTGGTCG TGCTGCAAAC CTTCTCGAAA GCCTGGGGAC TGGCGGCCCT GCGACTCGGT
ATGTGTTTTG CCTCGGAGGA GTTGATTCGG ATAATGAACA AGATAAAGCC GCCGTATAAC
ATCTCCGCAC CCACGCAGGC CCTGGCCCTC GAAGCCCTGG GTAACGAATC GGGAAAAAAC
GATATGGTAG CGCAGATACT GACCGAACGG CAGTCGCTGG CCGATGAATT ACGGGCGTTG
CCAACGGTGC AGGTCGTTCA CCCTTCGGAT GCTAACTTCC TGCTCGTTCA ATTTGCCGAT
GCAAAAGGGA CCTTCGAATA CCTCATCGAG CAGCAGGTTA TTGTTCGTGA TCGGTCAAAC
GTGAAACTTT GCGATGGTTG TCTGCGTATT TCGGTGGGTA CATCGACCGA AAACGAGCGG
TTAATGGCAG TACTCCGGCA AATGCCCGAC GTACCGCCAA GTACTAATTT GCCCCTCGGC
ACGGGTGATG ATGCCACCAA ACCAGAACTT GTATCAAACG CGTAG
 
Protein sequence
MFSLNNLLRP HILTLMPYSS ARDEYTGKEG VFLDANENPL GSTTSGNYNR YPDPHQWAIK 
QRLAPIKGVR PEHIFLGNGS DEPIDLLVRA TCTPGTDSIL IMPPTYGMYE VSASINDVKV
TKVPLTADFL VDTDAVLAAI TDTTKLIWLC SPNNPSGNLL QPEAIRTILN AAQQSLVIVD
EAYIDFADVP SWTSELDNYP NLVVLQTFSK AWGLAALRLG MCFASEELIR IMNKIKPPYN
ISAPTQALAL EALGNESGKN DMVAQILTER QSLADELRAL PTVQVVHPSD ANFLLVQFAD
AKGTFEYLIE QQVIVRDRSN VKLCDGCLRI SVGTSTENER LMAVLRQMPD VPPSTNLPLG
TGDDATKPEL VSNA