Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1784 |
Symbol | |
ID | 8725521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2156786 |
End bp | 2158075 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | histidinol dehydrogenase |
Protein accession | YP_003386628 |
Protein GI | 284036698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.112475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA TCCCTTTTCC CGACCGTGCT GAATGGCCTG CGCTGCTGGC TCGCCCGGTG CAGTCGACAC AACAGATTGA AGCGGTAGTA GCGCCTATTC TTGCTCAGGT TCGTGCCGGG GGCGATGCCG CTTTGGTTGA ACTGGCTCAG AAGTTTGATA AAGTCGACCT GTCGGCGGAG GGGATGGAGG TGCCTGCTTC GGAACTCGAT GCCGCCGAAC GTCAACTGAG TGATACGCTA AAGGAGGCCA TCCGGCAGGC CTACCAGAAC ATCCGGCTTT TTCACGAGCG GCAAAAGCAG CCCATTGAAA AAGTTGAAAC CATGCCGGGG GTCGTATGCT GGCGTAAAAG CGTTGGCATC GAAAAAGTAG GGCTGTACAT ACCGGGCGGC ACTGCGCCCC TGTTCAGCAC GGTGCTCATG CTGGGCATTC CGGCCCAGTT GGCAGGTTGC CGCGAGGTAG TTCTTTGTAC GCCCAGCAAC CACCCGGCCA TTTACTTTGC AGCCAAACTC GTTGGTATCA CGAAGGTATT TCGGATTGGG GGTGCTCAGG CCATTGCAGC CATGGCCTAC GGAACGGAAT CGGTTCCGCA GGTCTACAAG ATTTTTGGTC CCGGTAACCA ATACGTAACG GCGGCCAAGA TGCTGGTTGC CAAAGAAGGT ATGGCCATCG ACATGCCCGC CGGACCCAGC GAAGTGGCCG TGTATGCCGA TGATTCAGCG GTGCCGTCGT TTGTTGCCGC CGACTTGCTC TCGCAGGCCG AACACGGTGC TGACAGCCAG GTACTGCTGG TATCGACCAG TAAAAAACTA GTGTCGATGG TCAATCTGGT ACTGCCCACG CAATTGAGCA AGCTCCCCCG TCGCGAACTG GCTGCCAAAG CCCTTGAGAA CAGCAAGGCA ATTCTGGTCG ATACGGAAGC GGATGCCATT GACCTGTTAA ACGCTTATGC AGCCGAACAC CTGATTCTGA GCGTCGAAAA TGCCGAAGCC GTCGCGGAGA AAATTATTAA TGCAGGCTCT ATTTTTCTGG GCAACTACAC GCCTGAATCG GCCGGCGATT ACGCGTCGGG TACCAACCAT ACCTTGCCAA CAAACGGATT TGCAAGGGCC TACAGTGGGG TATCGCTGGA TAGTTTCGTG AAGAAGATCA CCATTCAGCA CATCACGCCG GAAGGTATCC AAAACCTCGG GCCGGTTGTG GAAGCCATGG CCGAAGCTGA ATCGCTCGAC GCCCACAAAC GCGCCGTCAG CCTGCGAATG GCAAGCCTGA GCGAAGTTAA TCCGGTCTGA
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Protein sequence | MNIIPFPDRA EWPALLARPV QSTQQIEAVV APILAQVRAG GDAALVELAQ KFDKVDLSAE GMEVPASELD AAERQLSDTL KEAIRQAYQN IRLFHERQKQ PIEKVETMPG VVCWRKSVGI EKVGLYIPGG TAPLFSTVLM LGIPAQLAGC REVVLCTPSN HPAIYFAAKL VGITKVFRIG GAQAIAAMAY GTESVPQVYK IFGPGNQYVT AAKMLVAKEG MAIDMPAGPS EVAVYADDSA VPSFVAADLL SQAEHGADSQ VLLVSTSKKL VSMVNLVLPT QLSKLPRREL AAKALENSKA ILVDTEADAI DLLNAYAAEH LILSVENAEA VAEKIINAGS IFLGNYTPES AGDYASGTNH TLPTNGFARA YSGVSLDSFV KKITIQHITP EGIQNLGPVV EAMAEAESLD AHKRAVSLRM ASLSEVNPV
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