| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1777 |
|---|
| Symbol | |
|---|
| ID | 8725514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2147603 |
|---|
| End bp | 2149816 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003386621 |
|---|
| Protein GI | 284036691 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.54513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCAGA CAATCTTACT CATTACCCCG CCCTTTACTC AGTTAAATAC CCCCTATCCG
GCAACGGCTT ATTTAAAAGG ATTTTTACAA ACGAAGGGAG TAACCGCCTT TCAGGCCGAT
TTGGGGATTG AGGTGATTCT GGCCCTGTTT TCGGCAAAGG GCTTGTCGGC GCTGTTTGCC
CAACTCGATG CTGCCGACGC TGAGTTGTCG GATAATAGTT ATCGAATCTG CCAGTTGCAG
CATGACTACA TCAGCACCAT TGACCCCGTA ATCCGGTTTC TGCAAAACAA AAACCCGACC
CTGGCACATA GCATTTGTGA CCGGACGTAC CTTCCCGAAG CTTCCCGTTT TGACCAGTTA
GAAGAACTGG ACTGGGCTTT CGGAACGATG GGGCTACACG ATAAAGCCCG TCATTTGGCC
ACACTGTACC TCGAAGACCT GAGCGACCTC ATTCAGGAAG CCGTCGACCC CCATTTTGGT
TTCAGCCGGT ATGCCGAACG ATTGGGGCGA TCGGCTACGC ATTTTGATGA ACTACACGAC
GCCCTGCAAG CGCCTTACAC CTGGGTATCC TCACGACTGG TCGATCTGCT GGAACAGAAA
ATTCAGCAAG TCAAACCCAC TGTCGTTTGC CTGACGGTAC CCTTTCCGGG TAATCTGTAT
GGTGCTCTGA CATGCGGGAA GTACCTCAAA GAGCACCATC CTGACATAAA AATTGTAATG
GGCGGGGGCT ATGCCAATAC GGAACTTCGT TCGCTTACGG AGCCCCGCGT TTTTGATTAC
GTTGACTTCA TCTGCCTCGA CGATGGCGAA GCCCCGCTCA TGACCTTGCT TGAGCATCTG
TCCGGTCAGC GCGGGTTACC GCAGTTGAAG CGCGTCTTTG CCCGCACAAA TGGCGTTGTC
ACATACTATA ACGGTGCTCG TGAAAAGGAT GTACCCCAAC GGGAAACGGG CACGCCCAAT
TACCGCAATT TACCGCTGCA CGATTACCTG TCAGTTATTG AAGTTGTTAA CCCCATGCAC
CGGCTCTGGA GCGATGGCCG CTGGAACAAG CTGACCCTGG CACATGGCTG CTACTGGGGC
AAATGTTCCT TCTGCGATAT AACGTTAGAT TACATCAAGC GGTACGAGCC CGTAACCGCT
TCGCTCCTGT GTGATCGAAT CGAGGAAATC ATCGAGCAAA CCGGACAGAC AGGATTCCAC
TTTGTGGACG AAGCCGCTCC GCCCGCGCTG ATGCGTGACC TGGCGATGGA AATTATTCGC
CGGAAACTAA CCGTAACCTG GTGGACTAAC ATCCGGTTTG AAGTAAGTTT TACCCCCGAT
CTGTGTGCCC TGCTGAAAGC GTCGGGCTGC ATTGCCGTAT CGGGCGGATT GGAAGTTGCC
TCCGACCGGT TGTTGGAACG GATGAAAAAA GGCGTAACCG TAGCCCAGGT CGCCCGGGTT
GCCGATGCCT TTACGCAGGC TGGCATTATG GTACACGCTT ACCTGATGTA TGGTTTTCCC
ACCCAAACCA TGCAGGAAAC CATCGACTCG CTGGAAATGG TGAGGCAGTT GTTTATGAAT
GGCATTGTTC AGTCGGGTTT CTGGCACCGC TTCGCCATGA CCGCCCACAG CCCGGTTGGC
GTTGACCCCG CCGGGTTCGA CGTGATGCGT ATTGGCCCCG CTGAACCGGG GAGCCGCCTG
GATGTTTTTG CAGACAACGA TCTGGAACAC GCTGATCCTA CGGGGGCAGA TCACGACCAG
TTTGCCGAAG GGCTACGAAA ATCGCTGTTC AACTACATGC ACGACGTGGG TTTCGACCTG
CCTTTGCAGA AGTGGTTTCC GTTTAAAATT CCGGTTACGT CCATCCCACC CCGCTATATC
GAAAAGGCAA TCAGCCAGCA ATCAGATAAA GCGCCCCGCC CGAATGCGTT TGTAATCTGG
CCGGGCAATC TGCCTACTCT GGAGGTTTTC GAGTTGCAGC AGGGCCGGAA GGTAGTCCAA
ATGGCCGAAC TGGAGTTCTA CAGTAAGCAG GGACACTGGC TGCTCGAAAC AACCGTCGAA
ACCGGGCAAT GGCTTGTCGA TACGCTCCCT CTACTCTCAA TCAGGCAGCC AGAGCCCTGT
TCGCTCGTCA GCTTAAAGGC CCATTATGAA GCCAGCCATA CCGACAGCTT TGCGGCTTTT
ATGCAATCAG CTACCTGGGC AAAACTCCGG GAACACGGAA TGCTGCTTGT CTGA
|
|---|
| Protein sequence | MEQTILLITP PFTQLNTPYP ATAYLKGFLQ TKGVTAFQAD LGIEVILALF SAKGLSALFA
QLDAADAELS DNSYRICQLQ HDYISTIDPV IRFLQNKNPT LAHSICDRTY LPEASRFDQL
EELDWAFGTM GLHDKARHLA TLYLEDLSDL IQEAVDPHFG FSRYAERLGR SATHFDELHD
ALQAPYTWVS SRLVDLLEQK IQQVKPTVVC LTVPFPGNLY GALTCGKYLK EHHPDIKIVM
GGGYANTELR SLTEPRVFDY VDFICLDDGE APLMTLLEHL SGQRGLPQLK RVFARTNGVV
TYYNGAREKD VPQRETGTPN YRNLPLHDYL SVIEVVNPMH RLWSDGRWNK LTLAHGCYWG
KCSFCDITLD YIKRYEPVTA SLLCDRIEEI IEQTGQTGFH FVDEAAPPAL MRDLAMEIIR
RKLTVTWWTN IRFEVSFTPD LCALLKASGC IAVSGGLEVA SDRLLERMKK GVTVAQVARV
ADAFTQAGIM VHAYLMYGFP TQTMQETIDS LEMVRQLFMN GIVQSGFWHR FAMTAHSPVG
VDPAGFDVMR IGPAEPGSRL DVFADNDLEH ADPTGADHDQ FAEGLRKSLF NYMHDVGFDL
PLQKWFPFKI PVTSIPPRYI EKAISQQSDK APRPNAFVIW PGNLPTLEVF ELQQGRKVVQ
MAELEFYSKQ GHWLLETTVE TGQWLVDTLP LLSIRQPEPC SLVSLKAHYE ASHTDSFAAF
MQSATWAKLR EHGMLLV
|
|---|
| |