Gene Slin_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1776 
Symbol 
ID8725513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2146858 
End bp2147595 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID 
ProductProtein of unknown function DUF2071 
Protein accessionYP_003386620 
Protein GI284036690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.348192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.652565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTA CCTTCCTGAC TGCCGAATGG CGGAATTTGA TTTTTGCTAA TTATGCCATC 
GACCGTCGAG TGCTTGAGCC GCTTGTTCCT TACGGAACGG AGCTGGATGA GTTTAATGGT
GTTTGCTACG GTAGCCTGGT CGGGTTTTAT TTCCAGCGGG TCAAACTATT TGGGGCGCTT
GCCGTTCCGT TGCACCAAGA ATTTGAGGAG TTTAACCTAC GTTTTTACGT ACGGCGCAAG
TCGGAGGATG GCTGGAAACG GGGTGTTGTT TTTGTGAAAG AGATTGTGCC TAAAGCAGCT
ATTTCACTGG TGGCGAATAC CCTCTATGGC GAACCCTACG CTACCCATGC CATGCGCCAC
TCCTGGGAGG TGGCCGCCGA TACCCAACGG ATTCGGTACG ATTGGAAAGT GGGCGCTGAC
TGGAATTTTA TCGAGGTGAA GGCCGATGCG GCAGGCCATC CATTGGTAAA GGGAAGCGAA
GAAGCCTTTA TTACCGAACA TTATTGGGGG TACACCCGGC GATCATCGCT GAAGAAAGGC
GAAAGCCGAA CGTCGGAGTA TGAGGTCGTT CATGTTCCCT GGTCAATTTA TCCAGTGCAG
GACTATGAGG TTCGGTGCGA TGTTGCCAAA CTATACGGTG CTGAGTTCGT ACCTTTCTTT
GAGCAGCCTC CGCATTCCGT TTTTCTGGCC GATGGTTCAC CAGTTGCGAT TAAGTCGGGA
GCTACATTAC GGGGTTGA
 
Protein sequence
MAFTFLTAEW RNLIFANYAI DRRVLEPLVP YGTELDEFNG VCYGSLVGFY FQRVKLFGAL 
AVPLHQEFEE FNLRFYVRRK SEDGWKRGVV FVKEIVPKAA ISLVANTLYG EPYATHAMRH
SWEVAADTQR IRYDWKVGAD WNFIEVKADA AGHPLVKGSE EAFITEHYWG YTRRSSLKKG
ESRTSEYEVV HVPWSIYPVQ DYEVRCDVAK LYGAEFVPFF EQPPHSVFLA DGSPVAIKSG
ATLRG