Gene Slin_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1772 
Symbol 
ID8725509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2141930 
End bp2143231 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content52% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003386616 
Protein GI284036686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.132205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.601217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCTTAGTTTC TATATGCATG CTGGCCTCGC TCATGAGCTA TGGCCAGAAT 
CCTGCCCCGG CAAAACCGCA GACCAAAACC ATTGCCCTCA TGGGTGGTAC GGTTCACGTA
GGTACCGGGC AGGTAATTCC GAATGGCATT GTACTGTTCA GCAACGGAGT GATCACGAAT
GTGGTTGATG GTACCCTCGT AAAACTGAAT CTGACCGATG TGGACGTCGT CGATGTGTCG
GGTAAGCACG TATATCCGGG CATCATCTCC CCGGCGTCTA CGGTGGGTTT GCAGGAAACC
GGTGCTGTTC GGGCCACGGT CGATAAGCAG GAGATTGGTA TTCTGAACCC CAATATCCGG
GCGCTGATTG CTTACAATAC GGATTCGGAA ATCATTCCTA CTATTCGGAA CAACGGCGTG
CTGGTGACCC AGGCAATGCC CCAGGGAGGG ACCGTTTCGG GAAGTTCGAG TGTTATGATG
GCCGACGGCT GGAACTGGGA AGATGCAGCA CTGAAAAAAG ATGATGGCAT CTGGCTCAAC
TGGCCGAACT ACTTTGCCCG TGATTTTAAC TTCGAAGACT TCACAACAGT CGTTAAGAAA
AATGATAAGC GCGGACCAGC CATTGATGCC CTACAGGCCA CATTCGCGGA TGCAAAAGCG
TACGCTGCCT CCCCAGCACC CGCTGTTATG AACCTGAAGC TGGAGGCCAT GCGCGGCTTA
TTCTCGGGAA AACAGAATTT GTACATTCGG GCCGATTATG GTAAAGACAT CATCGAAGCG
GTAACGTTCG CCAAGTCGGC GGGTGTTCAA AAAGTGGTTA TTGTGGGGGG TGAAGAAGCC
AATCGGGTTG TCTCATTCCT GAAAGACAAC AATGTGCCCG TTATTCTGAG CGGACTGCAC
CGGCTACCCA ACCGTGAAGA CGAGGACGTG GATTTACCAT ACCGTATGCC GGGTATTTTA
CACAAAGCCG GTATTCTGGT TAGCCTGAGT TATGCCGACG AGTGGTGGCG GACGCGTAAC
CTGCCGTTTC TGGCCGGAAC AGCCGCCGGT TTTGGTGTGG CCGACCGCGA AGAAGCTCTA
AAAATGGTTA CATCGAACAC GGCCAAAATC CTGGGCATCG ATAACCTGGT CGGTACGCTT
GAAAAAGGAA AGCAGGCTAC CTTATTTGTC TCAGCTGGCG ATGCTCTGGA TATGCGCACC
AACGTGATCG AGCACGTGTT CATTCAGGGC CGGAAAGTAA ACCTCGACGA CCGGCATAAG
CGCCTTTACA AGACGTATAA AGACAAATAC GAACAGAAGT AA
 
Protein sequence
MKKILVSICM LASLMSYGQN PAPAKPQTKT IALMGGTVHV GTGQVIPNGI VLFSNGVITN 
VVDGTLVKLN LTDVDVVDVS GKHVYPGIIS PASTVGLQET GAVRATVDKQ EIGILNPNIR
ALIAYNTDSE IIPTIRNNGV LVTQAMPQGG TVSGSSSVMM ADGWNWEDAA LKKDDGIWLN
WPNYFARDFN FEDFTTVVKK NDKRGPAIDA LQATFADAKA YAASPAPAVM NLKLEAMRGL
FSGKQNLYIR ADYGKDIIEA VTFAKSAGVQ KVVIVGGEEA NRVVSFLKDN NVPVILSGLH
RLPNREDEDV DLPYRMPGIL HKAGILVSLS YADEWWRTRN LPFLAGTAAG FGVADREEAL
KMVTSNTAKI LGIDNLVGTL EKGKQATLFV SAGDALDMRT NVIEHVFIQG RKVNLDDRHK
RLYKTYKDKY EQK