Gene Slin_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1750 
Symbol 
ID8725487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2105056 
End bp2106150 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content55% 
IMG OID 
ProductO-succinylbenzoic acid--CoA ligase 
Protein accessionYP_003386594 
Protein GI284036664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATC TTGATCCCGC GAAAACTAAC TCCTGGCCCA CGGCCCAAAC GCCTTACGAA 
GAAGAAGCTC TGGCGTTTTG CCGAGCTTGG CTGGGAGGAC AGCAACAGTT CACGCTGTAT
ACATCCGGCT CAACGGGCAC CCCAAAGCCT ATTGAACTGA CGCGCGCTCA GATGCAGGCG
AGCGCTCAGC TAACCGGTCA GACGCTTGGC CTACAAACGG GCGACGCGGC CCTCGTTTGT
CTGAATATCC GTTATGTGGC GGGAATTATG ATGCTCGTTC GGGGACTGGA GCTGGGTCTG
CCCATGACCA TTATTGACCC CTCGGCCAAT CCCCTCCTCG ACTTTACACC CGGAACCGAC
ACCTTTGCCT TTACAGCTCT TGTACCGCTG CAAGTTCAGA CGATTCTGGA TGGTAGCCCG
GACAAACTTC CGCTTCTCGA CGGCATGAAA GCCATTCTGG TCGGGGGAGC CGCTACCAGT
TCGGCACTTG AAAAAGCTAT AGGCCTTATT AAAGCCCCCG TTTATGCCAC CTATGGTATG
ACGGAGACGG TTTCTCACAT TGCGCTCCGC CGTCTCAATG GGTCGCTCGC CAGCGAATTC
TTTACGGCCT TACAGGGCGT TCAGCTGGGT ACCGATGCGA GGGGTTGTCT ACACATCACG
TCGGTCGCCA CCAATTTCGA CTTAATTCAG ACCAACGATG TGGTTGAACT GCTACCGGAC
ACTGGAACCG GAAACACGCA GTTCAGGCTA CTGGGACGAG CCGACCGGAT TATTAACAGC
GGTGGGGTAA AGGTGCAGCC CGAACAGGTA GAACAACTGA TTTATAGCGT ATTGGCCAAT
AGGCCTCCTA ACAACGATAC GTTGCCTCCC CGGCTTTTTG TAGCTGGCCT GCCCGACGAA
CGGCTGGGCC AGCGTGTGGT AGTAATTTGC GAGCAGGTAG CTATCGACAT GCAGCGGTGG
GCCACAGCCC AGGCGCTTAT CCGGGAGAAA CTTGGTGCCT ATGCTGTTCC CAAAGAAATT
ATACCCGTGG CTCGGTTTCT CGAAACCCCC ACCGGCAAGA TTGATCAGAA AGCGACTATA
GCTCAAATAG CTTAA
 
Protein sequence
MMNLDPAKTN SWPTAQTPYE EEALAFCRAW LGGQQQFTLY TSGSTGTPKP IELTRAQMQA 
SAQLTGQTLG LQTGDAALVC LNIRYVAGIM MLVRGLELGL PMTIIDPSAN PLLDFTPGTD
TFAFTALVPL QVQTILDGSP DKLPLLDGMK AILVGGAATS SALEKAIGLI KAPVYATYGM
TETVSHIALR RLNGSLASEF FTALQGVQLG TDARGCLHIT SVATNFDLIQ TNDVVELLPD
TGTGNTQFRL LGRADRIINS GGVKVQPEQV EQLIYSVLAN RPPNNDTLPP RLFVAGLPDE
RLGQRVVVIC EQVAIDMQRW ATAQALIREK LGAYAVPKEI IPVARFLETP TGKIDQKATI
AQIA