| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1740 |
|---|
| Symbol | |
|---|
| ID | 8725477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2091472 |
|---|
| End bp | 2092797 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | ABC-type Na+ efflux pump permease component- like protein |
|---|
| Protein accession | YP_003386584 |
|---|
| Protein GI | 284036654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA TTTTTCTTAT CATCAAACGA GAGTACATGG TTCGGGTTCG TAAAAAGTCG
TTCATCATTA TGACGATTTT AGGGCCGGTA CTGATTTTTG GCTTCTATGC CATTATTGGC
TGGGCCGCCG TTAGCTCGAT CAATCAAAAA AAAATAGCCG TCGTCGACGA AAGCGGACGG
TTCGTAAACC AGTTCAAAAA CGACGACGAA ACGGTATTCT CTTACCCGAA AGAATCCCTG
GCGGAAGCGA AAAAAACGTT CGTCAAGCAG GGTTATAATG CGTTGGTCTT TATCCCGAAG
GACGTCATTG AGCAGCCTAA GACGGTGAAA ATTTTCGCAG AAAAAAGCGT TAGTCTGGCC
CTTCAGAGCA ATATTGAGCG GGCTATCGGT AAAGAGATTG AGACCATTAA GCTGAAAGAA
GCGGGTATTA CCCAGAAAAT TATTCAGGAT GCCAAGGTCA ATGTCGATGC ACAAACCATC
AGCCTGAGCG ACGCGGGTGA AAAGAGTAAT AACGGAATTG CTACGACGAT CATCAGCGGA
TTTTGCGCCC TGTTGATCTA TATCTCGGTG CTGATCTATG GCACTCAGGT TATGCGGGGC
GTTATGGAAG AAAAAACCAA CCGGATTGTG GAGGTGATTA TCTCATCGGT CAAACCCTTT
CAGTTGATGC TGGGCAAGAT CATTGGGGTA GCCCTGGTCG GTCTGACCCA GTTTATGCTC
TGGATTGTGC TCACGATTGG CCTTATGACG ATAGGTTCAA AAATTATCAG CCAGCCTAAA
GAAACGGCTC AATCACAGAT GACAGCCCGT ATGAATGGCA TGCCGGGCGG TCAGGAAGTA
CAGGCTAAAA TGTCTACGGC TAAAAACCCG GTTGCCGACG TAATGGCAGC TATTGAAACG
CTGAATCTGC CGCTTATCGT TTCCTGCTTC CTTTTCTATT TCCTGGGTGG CTATTTGCTG
TATAGTGCCC TGTTTGGGGC TGTAGGGGCC GCTGTCGATA ACGAGACCGA AACGCAGCAG
TTCATGTTTC CGATTATGAT GCCCATTATT GCGGCCATTG CCTTTGCCCA GATTGCCGTT
CGTGATCCCG ACGGGCCGCT GGCTTTCTGG ACGTCCATGA TTCCCTTCAC CTCGCCCGTG
GTCATGATGG TCCGAATTCC CTTTGGCGTT CCCGCCTGGG AGCTGGCGCT GTCCATGGCG
CTTCTGGTGC TTGGCTTTGT CGGAACGACC TGGCTGGCCG CCCGTATTTA CAGGGTCGGT
ATCCTTATGT ACGGCAAGAA AGTCTCCTTC CGCGAACTCT CGAAATGGGT ATTTTATAAA
GGGTAG
|
|---|
| Protein sequence | MNTIFLIIKR EYMVRVRKKS FIIMTILGPV LIFGFYAIIG WAAVSSINQK KIAVVDESGR
FVNQFKNDDE TVFSYPKESL AEAKKTFVKQ GYNALVFIPK DVIEQPKTVK IFAEKSVSLA
LQSNIERAIG KEIETIKLKE AGITQKIIQD AKVNVDAQTI SLSDAGEKSN NGIATTIISG
FCALLIYISV LIYGTQVMRG VMEEKTNRIV EVIISSVKPF QLMLGKIIGV ALVGLTQFML
WIVLTIGLMT IGSKIISQPK ETAQSQMTAR MNGMPGGQEV QAKMSTAKNP VADVMAAIET
LNLPLIVSCF LFYFLGGYLL YSALFGAVGA AVDNETETQQ FMFPIMMPII AAIAFAQIAV
RDPDGPLAFW TSMIPFTSPV VMMVRIPFGV PAWELALSMA LLVLGFVGTT WLAARIYRVG
ILMYGKKVSF RELSKWVFYK G
|
|---|
| |