| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1719 |
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| Symbol | |
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| ID | 8725456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2064571 |
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| End bp | 2067339 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003386564 |
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| Protein GI | 284036634 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.149509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTC TTTCAACCCG GAAATTCAAT TCCCGTCTTC TCCTTTGCGC GTTACTGCTT
AGTATGGCAT GGACGACCGC TAAGGCACAA GCTGCAAAAA CTAGTTCTAG AGCAGCATCC
GGTTCTCCCT TCGGTAAGGA ACGTATAAAG CTCAACGAAG GCTGGCGGTT TATGCGCTAT
ACGATGGAGC CTGATAAACT GATCTATGAC GTTCGGCCAC CCATACAGGA TACCAACGAC
AGCAAAGTAG CCGACTCAAA ACCTACAGAA GCCGTACAGG TAGACAAAAA GGAGGAAGTT
CTGAAAACCT GGATTCTACC TTCGGGAAAT GACTTTATCA ACGACCCCGT CAAACGCCAT
ACACGACCCG TCGGCGATCC CGGAGCCGAT TTCCCGTTCG TGAAAGCGAC CTTCGCCGAC
GAGGCCTGGG AGGCTGTAAC CTTACCCCAC GACTGGGCTA TTAAAGGACC TTTTTACGCT
GGCGACCGAC CCGAAGTGGG CGGAGGAATG GGCCGATTAC CCAGCCACGG GGTAGCCTGG
TACCGGAACA AGATAGCCGT TTCGGCCGCA GACCGGGGTA AAATTATTTA TCTGGACATC
GACGGAGCCA TGTCGCACGC TATGGTTTGG CTCAACGGCC ATTTGGTAGG TGGCTGGCCT
TACGGCTATA ATTCCTTTCG GCTGGAACTA ACGCCACACC TAAATTTTGG AGGCATAAAT
CAACTGGCGA TTCGGGTTGA TAACCCAAAT TACTCGGCCA GATGGTATCC CGGTGGAGGG
CTGTATCGTA ACGTGTGGCT AACCAAAGTA GCCCCGGTGC ATGTGGCGCA GTGGGGAACG
TTTGTGACAA CCCCCGCCGT TTCGGCAACC GAAGCGATCA TCAACGTATC CGTGCAGATT
GAAAACAAAG GAAAAACGGA GCAGACCGTT GACGTAAAAA CCCAAATTTA TGCGCTGAAT
ACGTACTCAA AACCAACTGG AGCTTCTCTG GCCTCGTTGC CCACCCAAAA AATTACGGTA
AAGACGGGCG ACCATCAACC GATAGAGGGT AAAGTGACAA TCAAAAAACC AAAGCTATGG
GGCCCCTACC CGACGCAGAA ACCCAACCTG TATGTAGCCC GTACAAGCGT TTTTGTTGGC
GGTCGACAGG TTGACCAATT TGAGACCCCG TTTGGCATTC GCCAGGTGAA ATTCAATTCA
ACAAAAGGAT TGCTGGTCAA TGGGCAGCCG GTTCGTATAC AGGGCGTGAA CCAGCACCAC
GACCTGGGTG CCCTGGGAGC TGCATTTAAC GTTCGTGCCG CCGAACGCCA GCTCGAACGG
CTGCGTGAGC TGGGTTGCAA TGCCATCCGA ATGGCCCACA ATCCACCCGC CCCCGAACTC
CTCGACCTGA CCGACCGCAT GGGCTTTCTG GTCATCGATG AGATTTTTGA TAGCTGGGAG
CGCCGGAAAA CACCCCACGA TTTTCACCTG ATTTTCCCCG ACTGGCACGA GCCGGACACG
CGGGCGTTTA TTCGACGTGA CCGGAATCAC CCGTCCGTTA TCGCCTGGAG TTTTGGCAAC
GAAGTAGGCG AGCAGTATAC CGACACCGCC GGAGCAGCCA TTGCGCGAAA ACTGCACGAC
ATCGTACACG AAGAAGATCC CACCCGCCCA GCCTCAGCTT CGCAGAATTA CGCCAAGCCG
GATATGCCGT TCACGAAGGT GATGGATTTT TTGAGTCTTA ATTATCAGGG TGAGGGCATC
CGGGATGCAC CGGCTTATGC GCATTTGAAA GGCATTCGAA CCTCACCGCT TTACCCTGCC
TTTCAGAAAG CGTTTCCCGA CAAACTTATT ATCAGCAGCG AAACAGCCTC AGCCCTAAGC
ACCCGTGGTT CTTATACATT TCCGGTCGCG ACGGAAAACT CCGCCCCCGT AAGCGACGGC
GTGGGTGGTA ACCCTGTCAC CAAAGAAGTG AGTGGCTATG AGTTGTACAC GGCCCAGTTT
GGCGCTTCGC CGGATAAAGT TTTCGCGACC CAGGACCGCC ACCCGTACGT AGCCGGTGAA
TTCGTCTGGA CGGGCTGGGA TTATCTCGGT GAGCCGACAC CCTATTACTC GGCCCGAAGT
TCCTATTCGG GTATTATTGA TCTGGCGGGG TTCAAAAAAG ATCGTTTCTA TCTGTACCAG
TCCCGCTGGC GACCGGATTT GCCAATTGCC CACATTCTGC CCCACTGGAA CTGGCCAAAC
CGAGTCGGGG AAGTTACTCC GGTGCATGTG TTCACGTCGG GCGATGAAGC CGAACTGTTC
CTGAACGGCC AGTCGCTGGG CCGGAAAAAG AAAGCCGAAT ATGCGTATCG GCTCCGGTGG
GACGACGTGC AGTACAAACC CGGCGAACTC ACCGTCATCA CGTATAAAAA TGGAAAAAGG
TGGGCTGAAG AACGTATAAG AACGACCGAT AAACCCGCAG CGCTGGTGGC TCAGGCAGAC
CGATCAGCCA TACAGGCCAA TGGTGAAGAC CTGGCATTTG TGACGGTTAC CGTCACCGAC
AAGAATGGCC TGATGGTGCC CGACGCCAAC AATACTGTGA GTTTTAGTTT ACAGGGACCG
GGCGAAATCG TAGCCACCGA CAACGGCGAT CCGGCGAATC TGACTTCATT TTCTTCACAT
GAGCGTCAGG CCTACAACGG CATGGTGCTG GCCATCATAC GAGCGAAAAA AGGTGCCCCC
GGCAAATTGA CCCTAACAAT CAAAGCCGAG GGTTTGGCCA AAACCCAACT GAACATCCGA
AGTAATTGA
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| Protein sequence | MQALSTRKFN SRLLLCALLL SMAWTTAKAQ AAKTSSRAAS GSPFGKERIK LNEGWRFMRY
TMEPDKLIYD VRPPIQDTND SKVADSKPTE AVQVDKKEEV LKTWILPSGN DFINDPVKRH
TRPVGDPGAD FPFVKATFAD EAWEAVTLPH DWAIKGPFYA GDRPEVGGGM GRLPSHGVAW
YRNKIAVSAA DRGKIIYLDI DGAMSHAMVW LNGHLVGGWP YGYNSFRLEL TPHLNFGGIN
QLAIRVDNPN YSARWYPGGG LYRNVWLTKV APVHVAQWGT FVTTPAVSAT EAIINVSVQI
ENKGKTEQTV DVKTQIYALN TYSKPTGASL ASLPTQKITV KTGDHQPIEG KVTIKKPKLW
GPYPTQKPNL YVARTSVFVG GRQVDQFETP FGIRQVKFNS TKGLLVNGQP VRIQGVNQHH
DLGALGAAFN VRAAERQLER LRELGCNAIR MAHNPPAPEL LDLTDRMGFL VIDEIFDSWE
RRKTPHDFHL IFPDWHEPDT RAFIRRDRNH PSVIAWSFGN EVGEQYTDTA GAAIARKLHD
IVHEEDPTRP ASASQNYAKP DMPFTKVMDF LSLNYQGEGI RDAPAYAHLK GIRTSPLYPA
FQKAFPDKLI ISSETASALS TRGSYTFPVA TENSAPVSDG VGGNPVTKEV SGYELYTAQF
GASPDKVFAT QDRHPYVAGE FVWTGWDYLG EPTPYYSARS SYSGIIDLAG FKKDRFYLYQ
SRWRPDLPIA HILPHWNWPN RVGEVTPVHV FTSGDEAELF LNGQSLGRKK KAEYAYRLRW
DDVQYKPGEL TVITYKNGKR WAEERIRTTD KPAALVAQAD RSAIQANGED LAFVTVTVTD
KNGLMVPDAN NTVSFSLQGP GEIVATDNGD PANLTSFSSH ERQAYNGMVL AIIRAKKGAP
GKLTLTIKAE GLAKTQLNIR SN
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