Gene Slin_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1717 
Symbol 
ID8725454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2059741 
End bp2061669 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003386562 
Protein GI284036632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TACTCGTATT CTGCCTGCTG TTGGCAACCC ATTTTGTTGT AGAGGCCCAA 
ATCCGTTTAC CTAAATTGAT CAGCAATGGC ATGGTGCTCC AGCGCGATGC CAAACTTAAG
GTATGGGGAT GGGCCAGTCC AGGCGAAAAA ATAACTGTCC GCTTCAAAGA CAAGACCTAT
AAAACATCGA CCGATGCCGC CGGGAAGTGG CAAGTCGCGT TACCCCCGAT GACCGCTGGT
GGCCCTTACA GCATGGACAT TGCCGGGAGT TCCCGAATTA CGTTAAACGA TATTCTGATT
GGGGATGTGT GGTTTTGCAG CGGGCAGAGC AACATGGTTC ACCAGCTCAA TATCCATGAC
GTGACCTATG CCAACGAAAT CAAGACGGCC AACTTCCCCC AGATTCGGCA ATTCTGGGTG
CCTACCCTCA CGAGCCTGCA AGGCCCACAA GCCGACATTC CGAACGGGCA ATGGAAATCG
GCGGTTGGTG AGGACGTCAG GCCGTTTTCA GCGGTGGCTT ACTTTTTTGC GAAGAAAATC
CACCAAAAAT ATAACATACC AGTGGGCATT ATCAACGCCA GTGTGGGGGG AACGCCCATC
GAAGCCTGGA CCAGCGAAGA AGGATTTGCA GCCTTCCCGG CGGTGAAAGC TGTCATCGAA
AAGAACAAAG ACACAACGTA TATTAACAGC CTCAACCGCC GACCACCTAC GAACACGGCC
AACAGATCGA CACCACCGGT CGACTTGGGG ACGGCTGGCG CGACCAAGTG GTTCGACGTG
GCGTATGTCC CCAAAGGCTG GCGGCCGATC AACATTCCGG GTTATTGGGA AGATCAGGGC
ATAAAAGACC TGAACGGCGT AGTCTGGTAC CGACGCGAAA TCGACGTACC GGCGTCCATG
ACAGGCAAGC CCGCGAAAGT CTTTCTGGGC CGAATCGTGG ATGCCGACGA ACTATACATC
AACGGCAAGC AGGTTGGCAG AACGACCTAC CAGTACCCAC AACGCCGGTA CACGATCCCC
GACGACCTAT TAAAAGCGGG CAAGAATGTG TTTGTGGTTC GGGTAACCAA CACATCGGGG
AAAGGCGGCT TTGTGCCCGA CAAACCCTAT TGTCTTTTTG CGGGGGCCGA TACCGTCGAT
CTGAAAGGCA CCTGGCAATA TAAAGTGGGT ACCGCCTACC GGCCCATGTC CGGCGGCTTT
GGTGGCGGCA TCAACGCCCA GAATCAGCCA ACGGCGCTGT ACAATGCGAT GGTTGCCCCG
GAAATTGACT ATGCCATTAA AGGATTCTGC TGGTATCAGG GTGAAAGCAA TGCCGGGAAG
CCGCAGGAAT ACGAAACGCT GCTGACCGCC CTGATCAATG ACTGGCGAAC CAAGTGGAAG
CAAGGCCCGC TCCCGTTTCT GTACATCCAG CTACCCGGCT TTATGGAGTA CAATTACCAG
CCTTCCGAAA GTGGTTGGGC GGTACTGCGG GAAGCGCAAC TCAACGCGCT CAACGTAGCG
AACACAGGCA TGGTCGTGGC GATTGATCTG GGCGAATGGA ACGACATCCA CCCCGATAAC
AAGAAAGGCG TGGGCGAGCG GCTAGCACTA ACCGCCCTAA AAACAGCGTA TAAGGAAACT
ATCGTATCGT CAGGCCCCAT CTACCAATCG GCAACCGTTG ATGGCAACAA GATCGTGGTC
AGCTTCACCG ATACCGGCAG TGGACTGATT ACCAATGATG GGGAAGACCT CGGCGAATTT
GCCATTGCGG GCAGCGATAA AAAATTCGTG TGGGCCAAAG CGACAATTGA AAACGGCAAA
GTGGTAGTAT GGAGCGATGA AGTACCCAAT CCCCTGTATG TGCGCTATGC CTGGGCCGAC
AACCCGGTCA ACCCGAACTT GTATAACAAA GAAGGCCTGC CAGCCTCCCC TTTTCGAACG
GATAAGTAA
 
Protein sequence
MKRLLVFCLL LATHFVVEAQ IRLPKLISNG MVLQRDAKLK VWGWASPGEK ITVRFKDKTY 
KTSTDAAGKW QVALPPMTAG GPYSMDIAGS SRITLNDILI GDVWFCSGQS NMVHQLNIHD
VTYANEIKTA NFPQIRQFWV PTLTSLQGPQ ADIPNGQWKS AVGEDVRPFS AVAYFFAKKI
HQKYNIPVGI INASVGGTPI EAWTSEEGFA AFPAVKAVIE KNKDTTYINS LNRRPPTNTA
NRSTPPVDLG TAGATKWFDV AYVPKGWRPI NIPGYWEDQG IKDLNGVVWY RREIDVPASM
TGKPAKVFLG RIVDADELYI NGKQVGRTTY QYPQRRYTIP DDLLKAGKNV FVVRVTNTSG
KGGFVPDKPY CLFAGADTVD LKGTWQYKVG TAYRPMSGGF GGGINAQNQP TALYNAMVAP
EIDYAIKGFC WYQGESNAGK PQEYETLLTA LINDWRTKWK QGPLPFLYIQ LPGFMEYNYQ
PSESGWAVLR EAQLNALNVA NTGMVVAIDL GEWNDIHPDN KKGVGERLAL TALKTAYKET
IVSSGPIYQS ATVDGNKIVV SFTDTGSGLI TNDGEDLGEF AIAGSDKKFV WAKATIENGK
VVVWSDEVPN PLYVRYAWAD NPVNPNLYNK EGLPASPFRT DK