Gene Slin_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1675 
Symbol 
ID8725410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2011326 
End bp2012054 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content51% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003386521 
Protein GI284036591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTC TTCAGCAAAT AACCCCTTCG CTATACCAGA TTTCGCTGGG TGTCGTCAAC 
GCTTTCATCA TCAAAGACGG CGACGATGAC CTTACGCTGG TCGATACGGG TTACAAAGGC
AGTTTGCCCC GAATTTTCTC GGCGATTAAG CAGGGCGGTT ACAAGCCAGC GGCAATCAAA
CGGGTGATTC TAACCCACGC TCATCCCGAC CATGCCGGTA GTGCCGCTGC CATCAAGGCC
GAACTTGGTA TTCCGCTACT GGCACACCAG CAGGAAGCCC CTCTGCTCGA CGAGGGACTT
AGCGGAAACG CACCCATATC CTGTTCACCA GGCGTAATAA ATTGGCTAAT TTATTCCCTG
TTCATCAAAC GGGGAGCAAG TACTATTGAT CCGGTGCATG TCGATGACCG GTTAAACCAC
CTTGACATAA TTTCGGTAGC GGGTGGGCTT CAGGTAATTC ACACTCCGGG GCATAGTGCT
GGCCATATAG CCCTGTTACT TAAGCGTGAA GGCGTATTGA TAGCCGGTGA TCTGTGCGCG
AATGTTGCCG GTCTGGATTT AAGTACAGTC TACGAAAACA GAGCCCTGGC ACTCAAAAGT
ATTATGGAAG TAGGGGCATT CCATTTTGAT AAAGCTGTAT TTGGCCACGG CAGACCGCTC
AAACAGCAGG CAAACCGACA ATTGAACACC AAATTCGGCC CTATGTATCA CCGGCAGAAT
ATCCCATGA
 
Protein sequence
MPTLQQITPS LYQISLGVVN AFIIKDGDDD LTLVDTGYKG SLPRIFSAIK QGGYKPAAIK 
RVILTHAHPD HAGSAAAIKA ELGIPLLAHQ QEAPLLDEGL SGNAPISCSP GVINWLIYSL
FIKRGASTID PVHVDDRLNH LDIISVAGGL QVIHTPGHSA GHIALLLKRE GVLIAGDLCA
NVAGLDLSTV YENRALALKS IMEVGAFHFD KAVFGHGRPL KQQANRQLNT KFGPMYHRQN
IP